Seita.4G202500.1

Description : beta-type-3 component *(PBC) of 26S proteasome

Gene families : OG_42_0002994 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0002994_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G202500.1
Cluster	HCAA Clusters: Cluster_89

Target	Alias	Description	ECC score	Gene Family Method
A4A49_29223	No alias	proteasome subunit beta type-3-a	0.04	Orthogroups_2024-Update
Cre06.g267500	No alias	20S proteasome beta subunit C2	0.09	Orthogroups_2024-Update
HORVU7Hr1G115980.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.03	Orthogroups_2024-Update
LOC_Os02g08520	No alias	peptidase, T1 family, putative, expressed	0.04	Orthogroups_2024-Update
Sobic.004G066800.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.06	Orthogroups_2024-Update
Sobic.010G204500.1	No alias	beta-type-3 component *(PBC) of 26S proteasome	0.07	Orthogroups_2024-Update
Sopen04g004540	No alias	Proteasome subunit	0.04	Orthogroups_2024-Update
evm.model.contig_575.4	No alias	(q9lst7\|psb3_orysa : 259.0) Proteasome subunit beta type...	0.03	Orthogroups_2024-Update
evm.model.tig00000826.22	No alias	(q9lst7\|psb3_orysa : 263.0) Proteasome subunit beta type...	0.06	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
CC	GO:0005575	cellular_component	None	Extended
CC	GO:0005839	proteasome core complex	IEA	16Dec
BP	GO:0006508	proteolysis	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
CC	GO:0032991	protein-containing complex	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
CC	GO:0044424	intracellular part	None	Extended
CC	GO:0044464	cell part	None	Extended
BP	GO:0051603	proteolysis involved in cellular protein catabolic process	IEA	16Dec
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
BP	GO:0006099	tricarboxylic acid cycle	IEP	Predicted GO
BP	GO:0006101	citrate metabolic process	IEP	Predicted GO
BP	GO:0006511	ubiquitin-dependent protein catabolic process	IEP	Predicted GO
BP	GO:0006888	ER to Golgi vesicle-mediated transport	IEP	Predicted GO
BP	GO:0009056	catabolic process	IEP	Predicted GO
BP	GO:0009057	macromolecule catabolic process	IEP	Predicted GO
BP	GO:0016999	antibiotic metabolic process	IEP	Predicted GO
CC	GO:0019773	proteasome core complex, alpha-subunit complex	IEP	Predicted GO
BP	GO:0019941	modification-dependent protein catabolic process	IEP	Predicted GO
CC	GO:0030117	membrane coat	IEP	Predicted GO
CC	GO:0030120	vesicle coat	IEP	Predicted GO
CC	GO:0030127	COPII vesicle coat	IEP	Predicted GO
BP	GO:0043632	modification-dependent macromolecule catabolic process	IEP	Predicted GO
BP	GO:0044248	cellular catabolic process	IEP	Predicted GO
BP	GO:0044265	cellular macromolecule catabolic process	IEP	Predicted GO
CC	GO:0044425	membrane part	IEP	Predicted GO
CC	GO:0044433	cytoplasmic vesicle part	IEP	Predicted GO
CC	GO:0045273	respiratory chain complex II	IEP	Predicted GO
BP	GO:0048193	Golgi vesicle transport	IEP	Predicted GO
BP	GO:0072350	tricarboxylic acid metabolic process	IEP	Predicted GO
CC	GO:0098796	membrane protein complex	IEP	Predicted GO
CC	GO:0098803	respiratory chain complex	IEP	Predicted GO
BP	GO:1901575	organic substance catabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001353	Proteasome_sua/b	7	189

External Links

No external refs found!