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  5. Seita.4G205800.1

Seita.4G205800.1


Description : MYB class-R2R3 subgroup-22/23 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G205800.1
Cluster HCAA Clusters: Cluster_52

Target Alias Description ECC score Gene Family Method Actions
A4A49_09539 No alias transcription factor myb44 0.06 Orthogroups_2024-Update
A4A49_10535 No alias myb-related protein 3r-1 0.04 Orthogroups_2024-Update
A4A49_36591 No alias transcription factor myb44 0.06 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
At1g26780 No alias MYB117 [Source:UniProtKB/TrEMBL;Acc:A0A178WCI3] 0.03 Orthogroups_2024-Update
At1g69560 No alias myb domain protein 105 [Source:TAIR;Acc:AT1G69560] 0.03 Orthogroups_2024-Update
At3g27785 No alias Transcription factor MYB118... 0.03 Orthogroups_2024-Update
At3g55730 No alias MYB transcription factor-like protein... 0.03 Orthogroups_2024-Update
At5g11050 No alias Transcription factor MYB64... 0.03 Orthogroups_2024-Update
At5g17800 No alias Transcription factor MYB56... 0.03 Orthogroups_2024-Update
Bradi2g23310 No alias myb domain protein 3r-5 0.03 Orthogroups_2024-Update
Brara.B03351.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.04 Orthogroups_2024-Update
Brara.G01177.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
Brara.H02151.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.09G169300 No alias myb domain protein 52 0.02 Orthogroups_2024-Update
Glyma.14G063400 No alias myb domain protein 109 0.03 Orthogroups_2024-Update
Glyma.16G072700 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.19G062000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.20G034100 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
HORVU3Hr1G085570.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
HORVU4Hr1G077230.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.04 Orthogroups_2024-Update
HORVU7Hr1G025720.1 No alias MYB class-R2R3 transcription factor 0.04 Orthogroups_2024-Update
LOC_Os05g38460 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g06740 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
PSME_00025751-RA No alias (at3g50060 : 193.0) Encodes a member of the R2R3... 0.04 Orthogroups_2024-Update
Potri.006G085600 No alias myb domain protein 3r-5 0.03 Orthogroups_2024-Update
Potri.007G048900 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Potri.012G039400 No alias myb domain protein 52 0.05 Orthogroups_2024-Update
Potri.014G035100 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Potri.017G017600 No alias myb domain protein 52 0.02 Orthogroups_2024-Update
Pp1s200_41V6 No alias F24J1.31; myb family transcription factor (MYB105)... 0.03 Orthogroups_2024-Update
Seita.2G140900.1 No alias Unknown function 0.04 Orthogroups_2024-Update
Seita.3G079800.1 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
Seita.9G054400.1 No alias MYB class-R2R3 transcription factor 0.03 Orthogroups_2024-Update
Sobic.003G357300.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Sobic.005G104800.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
evm.model.contig_4410.19 No alias (at5g02320 : 122.0) Encodes a putative c-MYB-like... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0005384 manganese ion transmembrane transporter activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006650 glycerophospholipid metabolic process IEP Predicted GO
BP GO:0006873 cellular ion homeostasis IEP Predicted GO
BP GO:0006875 cellular metal ion homeostasis IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
MF GO:0016307 phosphatidylinositol phosphate kinase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019725 cellular homeostasis IEP Predicted GO
MF GO:0020037 heme binding IEP Predicted GO
BP GO:0030003 cellular cation homeostasis IEP Predicted GO
BP GO:0030026 cellular manganese ion homeostasis IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
BP GO:0046488 phosphatidylinositol metabolic process IEP Predicted GO
MF GO:0046906 tetrapyrrole binding IEP Predicted GO
MF GO:0046915 transition metal ion transmembrane transporter activity IEP Predicted GO
BP GO:0046916 cellular transition metal ion homeostasis IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
BP GO:0048878 chemical homeostasis IEP Predicted GO
BP GO:0050801 ion homeostasis IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0055065 metal ion homeostasis IEP Predicted GO
BP GO:0055071 manganese ion homeostasis IEP Predicted GO
BP GO:0055076 transition metal ion homeostasis IEP Predicted GO
BP GO:0055080 cation homeostasis IEP Predicted GO
BP GO:0055082 cellular chemical homeostasis IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
BP GO:0098771 inorganic ion homeostasis IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!