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  5. Seita.4G207400.1

Seita.4G207400.1


Description : substrate-to-CDC48 bridging factor *(PUX3/4/5)


Gene families : OG_42_0001863 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001863_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G207400.1
Cluster HCAA Clusters: Cluster_22

Target Alias Description ECC score Gene Family Method Actions
Cre01.g034451 No alias plant UBX domain containing protein 4 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
CC GO:0005669 transcription factor TFIID complex IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
MF GO:0016409 palmitoyltransferase activity IEP Predicted GO
CC GO:0044451 nucleoplasm part IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
InterPro domains Description Start Stop
IPR001012 UBX_dom 374 444
IPR012989 SEP_domain 268 339
No external refs found!