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  5. Seita.4G208000.1

Seita.4G208000.1


Description : solute transporter *(AAAP)


Gene families : OG_42_0000560 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000560_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G208000.1
Cluster HCAA Clusters: Cluster_162

Target Alias Description ECC score Gene Family Method Actions
A4A49_20408 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Bradi2g53730 No alias Transmembrane amino acid transporter family protein 0.04 Orthogroups_2024-Update
Brara.F03062.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update
LOC_Os06g16420 No alias amino acid transporter, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g42720 No alias amino acid transporter, putative, expressed 0.03 Orthogroups_2024-Update
Potri.002G114300 No alias Transmembrane amino acid transporter family protein 0.02 Orthogroups_2024-Update
Pp1s300_58V6 No alias amino acid transporter 0.02 Orthogroups_2024-Update
Sobic.010G199200.1 No alias solute transporter *(AAAP) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR013057 AA_transpt_TM 43 439
No external refs found!