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  5. Seita.4G208100.1

Seita.4G208100.1


Description : Unknown function


Gene families : OG_42_0000043 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000043_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G208100.1

Target Alias Description ECC score Gene Family Method Actions
Brara.C02094.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.02 Orthogroups_2024-Update
Brara.G00930.1 No alias E3 ubiquitin ligase *(SNIPER) 0.03 Orthogroups_2024-Update
Brara.I03890.1 No alias RING-H2-class BTL-subclass E3 ubiquitin ligase 0.01 Orthogroups_2024-Update
Glyma.10G089800 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.18G218200 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
PSME_00014469-RA No alias (at3g19950 : 173.0) RING/U-box superfamily protein;... 0.03 Orthogroups_2024-Update
PSME_00026521-RA No alias (at3g19950 : 152.0) RING/U-box superfamily protein;... 0.02 Orthogroups_2024-Update
Potri.012G065300 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Pp1s37_80V6 No alias No description available 0.02 Orthogroups_2024-Update
Seita.6G190900.1 No alias Unknown function 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004386 helicase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
BP GO:0006996 organelle organization IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0032502 developmental process IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
BP GO:0048364 root development IEP Predicted GO
BP GO:0048367 shoot system development IEP Predicted GO
BP GO:0048731 system development IEP Predicted GO
BP GO:0048856 anatomical structure development IEP Predicted GO
BP GO:0051276 chromosome organization IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
BP GO:0065008 regulation of biological quality IEP Predicted GO
BP GO:0099402 plant organ development IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 234 275
No external refs found!