Seita.4G210500.1

Description : subfamily ABCG transporter

Gene families : OG_42_0000055 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000055_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G210500.1
Cluster	HCAA Clusters: Cluster_169

Target	Alias	Description	ECC score	Gene Family Method
A4A49_24419	No alias	pleiotropic drug resistance protein 3	0.03	Orthogroups_2024-Update
Brara.G02000.1	No alias	subfamily ABCG transporter	0.03	Orthogroups_2024-Update
Glyma.03G192700	No alias	pleiotropic drug resistance 11	0.02	Orthogroups_2024-Update
Glyma.17G120100	No alias	pleiotropic drug resistance 4	0.03	Orthogroups_2024-Update
LOC_Os01g08260	No alias	pleiotropic drug resistance protein 4, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os01g42350	No alias	pleiotropic drug resistance protein, putative, expressed	0.03	Orthogroups_2024-Update
Pp1s36_257V6	No alias	atp-binding cassette	0.02	Orthogroups_2024-Update
Pp1s375_55V6	No alias	atp-binding cassette	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	IEA	16Dec
CC	GO:0005575	cellular_component	None	Extended
MF	GO:0008144	drug binding	None	Extended
CC	GO:0016020	membrane	IEA	16Dec
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004601	peroxidase activity	IEP	Predicted GO
MF	GO:0016209	antioxidant activity	IEP	Predicted GO
MF	GO:0016651	oxidoreductase activity, acting on NAD(P)H	IEP	Predicted GO
MF	GO:0016684	oxidoreductase activity, acting on peroxide as acceptor	IEP	Predicted GO
MF	GO:0050664	oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003439	ABC_transporter-like	883	1035
IPR003439	ABC_transporter-like	169	351
IPR013581	PDR_assoc	721	781
IPR013525	ABC_2_trans	504	716
IPR013525	ABC_2_trans	1180	1394
IPR029481	ABC_trans_N	91	142

External Links

No external refs found!