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  5. Seita.4G213100.1

Seita.4G213100.1


Description : ARID-type transcription factor


Gene families : OG_42_0001777 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001777_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G213100.1
Cluster HCAA Clusters: Cluster_254

Target Alias Description ECC score Gene Family Method Actions
Brara.H02305.1 No alias ARID-type transcription factor 0.04 Orthogroups_2024-Update
MA_103907g0010 No alias (at2g17410 : 271.0) ARID/BRIGHT DNA-binding... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005546 phosphatidylinositol-4,5-bisphosphate binding IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006366 transcription by RNA polymerase II IEP Predicted GO
BP GO:0006417 regulation of translation IEP Predicted GO
BP GO:0006448 regulation of translational elongation IEP Predicted GO
BP GO:0010608 posttranscriptional regulation of gene expression IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016765 transferase activity, transferring alkyl or aryl (other than methyl) groups IEP Predicted GO
BP GO:0017182 peptidyl-diphthamide metabolic process IEP Predicted GO
BP GO:0017183 peptidyl-diphthamide biosynthetic process from peptidyl-histidine IEP Predicted GO
BP GO:0018202 peptidyl-histidine modification IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0034248 regulation of cellular amide metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
MF GO:0090560 2-(3-amino-3-carboxypropyl)histidine synthase activity IEP Predicted GO
BP GO:1900247 regulation of cytoplasmic translational elongation IEP Predicted GO
MF GO:1901981 phosphatidylinositol phosphate binding IEP Predicted GO
MF GO:1902936 phosphatidylinositol bisphosphate binding IEP Predicted GO
BP GO:2000765 regulation of cytoplasmic translation IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 382 463
IPR001606 ARID_dom 171 255
No external refs found!