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  5. Seita.4G216100.1

Seita.4G216100.1


Description : Unknown function


Gene families : OG_42_0001966 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001966_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G216100.1
Cluster HCAA Clusters: Cluster_117

Target Alias Description ECC score Gene Family Method Actions
A4A49_28558 No alias hypothetical protein 0.02 Orthogroups_2024-Update
Solyc12g100120 No alias DUF1680 domain protein (AHRD V3.3 *** G7JCI1_MEDTR) 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004827 proline-tRNA ligase activity IEP Predicted GO
BP GO:0006433 prolyl-tRNA aminoacylation IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0008198 ferrous iron binding IEP Predicted GO
MF GO:0008417 fucosyltransferase activity IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
BP GO:0071554 cell wall organization or biogenesis IEP Predicted GO
InterPro domains Description Start Stop
IPR012878 Glyco_hydro_127 130 319
No external refs found!