Seita.4G216500.1

Description : ssDNA endonuclease *(COM1/SAE2) & ssDNA endonuclease *(COM1/SAE2)

Gene families : OG_42_0006122 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0006122_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.4G216500.1
Cluster	HCAA Clusters: Cluster_149

Target	Alias	Description	ECC score	Gene Family Method	Actions
Mp1g17430.1	No alias	ssDNA endonuclease (COM1/SAE2). homologous recombination...	0.03	Orthogroups_2024-Update
Potri.001G269700	No alias	gamma response gene 1	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
BP	GO:0006139	nucleobase-containing compound metabolic process	None	Extended
BP	GO:0006259	DNA metabolic process	None	Extended
BP	GO:0006281	DNA repair	IEA	16Dec
BP	GO:0006725	cellular aromatic compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0006950	response to stress	None	Extended
BP	GO:0006974	cellular response to DNA damage stimulus	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
BP	GO:0033554	cellular response to stress	None	Extended
BP	GO:0034641	cellular nitrogen compound metabolic process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044260	cellular macromolecule metabolic process	None	Extended
BP	GO:0046483	heterocycle metabolic process	None	Extended
BP	GO:0050896	response to stimulus	None	Extended
BP	GO:0051716	cellular response to stimulus	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:0090304	nucleic acid metabolic process	None	Extended
BP	GO:1901360	organic cyclic compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004650	polygalacturonase activity	IEP	Predicted GO
MF	GO:0005319	lipid transporter activity	IEP	Predicted GO
BP	GO:0006869	lipid transport	IEP	Predicted GO
CC	GO:0009579	thylakoid	IEP	Predicted GO
BP	GO:0061024	membrane organization	IEP	Predicted GO
BP	GO:0120009	intermembrane lipid transfer	IEP	Predicted GO
MF	GO:0120013	intermembrane lipid transfer activity	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR013882	Ctp1_C	432	463
IPR013882	Ctp1_C	480	506

External Links

No external refs found!