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  5. Seita.4G216900.1

Seita.4G216900.1


Description : Unknown function


Gene families : OG_42_0005701 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005701_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G216900.1
Cluster HCAA Clusters: Cluster_103

Target Alias Description ECC score Gene Family Method Actions
A4A49_31180 No alias pentatricopeptide repeat-containing protein 0.04 Orthogroups_2024-Update
Glyma.05G230700 No alias protein kinase family protein 0.03 Orthogroups_2024-Update
Glyma.08G038200 No alias protein kinase family protein 0.05 Orthogroups_2024-Update
Glyma.14G141800 No alias Tetratricopeptide repeat (TPR)-like superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os01g12810 No alias retrotransposon protein, putative, unclassified, expressed 0.06 Orthogroups_2024-Update
Potri.018G081700 No alias protein kinase family protein 0.05 Orthogroups_2024-Update
Solyc07g032380 No alias DNA LIGASE 6 (AHRD V3.3 --* AT1G66730.1) 0.06 Orthogroups_2024-Update
Sopen07g016320 No alias PPR repeat family 0.03 Orthogroups_2024-Update
Sopen08g022090 No alias PPR repeat family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000096 sulfur amino acid metabolic process IEP Predicted GO
BP GO:0000097 sulfur amino acid biosynthetic process IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004476 mannose-6-phosphate isomerase activity IEP Predicted GO
MF GO:0005319 lipid transporter activity IEP Predicted GO
MF GO:0005548 phospholipid transporter activity IEP Predicted GO
BP GO:0006534 cysteine metabolic process IEP Predicted GO
BP GO:0006535 cysteine biosynthetic process from serine IEP Predicted GO
BP GO:0006563 L-serine metabolic process IEP Predicted GO
BP GO:0006869 lipid transport IEP Predicted GO
MF GO:0009001 serine O-acetyltransferase activity IEP Predicted GO
BP GO:0009069 serine family amino acid metabolic process IEP Predicted GO
BP GO:0009070 serine family amino acid biosynthetic process IEP Predicted GO
BP GO:0015748 organophosphate ester transport IEP Predicted GO
BP GO:0015914 phospholipid transport IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
MF GO:0016407 acetyltransferase activity IEP Predicted GO
MF GO:0016412 serine O-acyltransferase activity IEP Predicted GO
MF GO:0016413 O-acetyltransferase activity IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016860 intramolecular oxidoreductase activity IEP Predicted GO
MF GO:0016861 intramolecular oxidoreductase activity, interconverting aldoses and ketoses IEP Predicted GO
BP GO:0019344 cysteine biosynthetic process IEP Predicted GO
MF GO:0033926 glycopeptide alpha-N-acetylgalactosaminidase activity IEP Predicted GO
MF GO:0140103 catalytic activity, acting on a glycoprotein IEP Predicted GO
InterPro domains Description Start Stop
IPR033443 PPR_long 292 399
IPR002885 Pentatricopeptide_repeat 134 181
IPR002885 Pentatricopeptide_repeat 414 460
IPR002885 Pentatricopeptide_repeat 205 253
No external refs found!