Description : component *(LHCa3) of LHC-I complex
Gene families : OG_42_0005254 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0005254_tree
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
Type | Description | Actions |
---|---|---|
Neighborhood | Setaria italica: Seita.4G219400.1 | |
Cluster | HCAA Clusters: Cluster_218 |
Target | Alias | Description | ECC score | Gene Family Method | Actions |
---|---|---|---|---|---|
160411 | No alias | photosystem I light harvesting complex gene 3 | 0.03 | Orthogroups_2024-Update | |
A4A49_09113 | No alias | chlorophyll a-b binding protein 8, chloroplastic | 0.05 | Orthogroups_2024-Update | |
A4A49_28400 | No alias | chlorophyll a-b binding protein 8, chloroplastic | 0.07 | Orthogroups_2024-Update | |
At1g61520 | No alias | Chlorophyll a-b binding protein, chloroplastic... | 0.06 | Orthogroups_2024-Update | |
Bradi3g07190 | No alias | photosystem I light harvesting complex gene 3 | 0.05 | Orthogroups_2024-Update | |
Brara.A02541.1 | No alias | component *(LHCa3) of LHC-I complex | 0.07 | Orthogroups_2024-Update | |
Brara.I01499.1 | No alias | component *(LHCa3) of LHC-I complex | 0.05 | Orthogroups_2024-Update | |
Cre11.g467573 | No alias | photosystem I light harvesting complex gene 3 | 0.04 | Orthogroups_2024-Update | |
Glyma.02G309500 | No alias | photosystem I light harvesting complex gene 3 | 0.09 | Orthogroups_2024-Update | |
Glyma.14G003400 | No alias | photosystem I light harvesting complex gene 3 | 0.07 | Orthogroups_2024-Update | |
HORVU6Hr1G033160.11 | No alias | component *(LHCa3) of LHC-I complex | 0.04 | Orthogroups_2024-Update | |
Kfl00560_0090 | kfl00560_0090_v1.1 | (at1g61520 : 268.0) PSI type III chlorophyll a/b-binding... | 0.03 | Orthogroups_2024-Update | |
LOC_Os02g10390 | No alias | chlorophyll A-B binding protein, putative, expressed | 0.04 | Orthogroups_2024-Update | |
MA_815900g0010 | No alias | (at1g61520 : 372.0) PSI type III chlorophyll a/b-binding... | 0.04 | Orthogroups_2024-Update | |
Mp4g00930.1 | No alias | component LHCa3 of LHC-I complex | 0.03 | Orthogroups_2024-Update | |
PSME_00027596-RA | No alias | (at1g61520 : 359.0) PSI type III chlorophyll a/b-binding... | 0.03 | Orthogroups_2024-Update | |
Potri.014G172400 | No alias | photosystem I light harvesting complex gene 3 | 0.02 | Orthogroups_2024-Update | |
Pp1s197_123V6 | No alias | type iii chlorophyll a b-binding protein | 0.05 | Orthogroups_2024-Update | |
Pp1s214_86V6 | No alias | type iii chlorophyll a b-binding protein | 0.05 | Orthogroups_2024-Update | |
Pp1s429_33V6 | No alias | type iii chlorophyll a b-binding protein | 0.05 | Orthogroups_2024-Update | |
Sobic.010G189300.1 | No alias | component *(LHCa3) of LHC-I complex | 0.17 | Orthogroups_2024-Update | |
Solyc10g007690 | No alias | Chlorophyll a-b binding protein, chloroplastic (AHRD... | 0.05 | Orthogroups_2024-Update | |
Solyc12g011280 | No alias | Chlorophyll a-b binding protein, chloroplastic (AHRD... | 0.11 | Orthogroups_2024-Update | |
Sopen10g003600 | No alias | Chlorophyll A-B binding protein | 0.04 | Orthogroups_2024-Update | |
Sopen12g006610 | No alias | Chlorophyll A-B binding protein | 0.05 | Orthogroups_2024-Update |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
No GO annotation available for this sequence |
Type | GO Term | Name | Evidence | Source |
---|---|---|---|---|
MF | GO:0004721 | phosphoprotein phosphatase activity | IEP | Predicted GO |
MF | GO:0005102 | signaling receptor binding | IEP | Predicted GO |
BP | GO:0006536 | glutamate metabolic process | IEP | Predicted GO |
BP | GO:0006537 | glutamate biosynthetic process | IEP | Predicted GO |
MF | GO:0008083 | growth factor activity | IEP | Predicted GO |
MF | GO:0008138 | protein tyrosine/serine/threonine phosphatase activity | IEP | Predicted GO |
BP | GO:0008283 | cell proliferation | IEP | Predicted GO |
BP | GO:0009064 | glutamine family amino acid metabolic process | IEP | Predicted GO |
BP | GO:0009084 | glutamine family amino acid biosynthetic process | IEP | Predicted GO |
CC | GO:0009521 | photosystem | IEP | Predicted GO |
CC | GO:0009522 | photosystem I | IEP | Predicted GO |
CC | GO:0009538 | photosystem I reaction center | IEP | Predicted GO |
CC | GO:0009654 | photosystem II oxygen evolving complex | IEP | Predicted GO |
MF | GO:0015930 | glutamate synthase activity | IEP | Predicted GO |
BP | GO:0015979 | photosynthesis | IEP | Predicted GO |
MF | GO:0016638 | oxidoreductase activity, acting on the CH-NH2 group of donors | IEP | Predicted GO |
MF | GO:0016717 | oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water | IEP | Predicted GO |
MF | GO:0016779 | nucleotidyltransferase activity | IEP | Predicted GO |
CC | GO:0019898 | extrinsic component of membrane | IEP | Predicted GO |
MF | GO:0030545 | receptor regulator activity | IEP | Predicted GO |
BP | GO:0043648 | dicarboxylic acid metabolic process | IEP | Predicted GO |
BP | GO:0043650 | dicarboxylic acid biosynthetic process | IEP | Predicted GO |
CC | GO:0044425 | membrane part | IEP | Predicted GO |
CC | GO:0044436 | thylakoid part | IEP | Predicted GO |
MF | GO:0048018 | receptor ligand activity | IEP | Predicted GO |
CC | GO:0098796 | membrane protein complex | IEP | Predicted GO |
InterPro domains | Description | Start | Stop |
---|---|---|---|
IPR022796 | Chloroa_b-bind | 57 | 235 |
No external refs found! |