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  5. Seita.4G221900.1

Seita.4G221900.1


Description : MYB class-R2R3 subgroup-18 transcription factor


Gene families : OG_42_0000002 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G221900.1
Cluster HCAA Clusters: Cluster_253

Target Alias Description ECC score Gene Family Method Actions
At1g34670 No alias Transcription factor MYB93... 0.02 Orthogroups_2024-Update
At4g17785 No alias Transcription factor MYB39... 0.02 Orthogroups_2024-Update
At5g15310 No alias MYB16 [Source:UniProtKB/TrEMBL;Acc:A0A178UJ10] 0.04 Orthogroups_2024-Update
At5g65790 No alias At5g65790 [Source:UniProtKB/TrEMBL;Acc:O49538] 0.03 Orthogroups_2024-Update
Bradi5g15760 No alias myb domain protein 15 0.03 Orthogroups_2024-Update
Brara.F00557.1 No alias MYB class-R2R3 subgroup-1 transcription factor 0.04 Orthogroups_2024-Update
Brara.F01146.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.02 Orthogroups_2024-Update
Brara.G02641.1 No alias MYB class-R2R3 transcription factor 0.02 Orthogroups_2024-Update
GRMZM2G117244 No alias myb domain protein 68 0.02 Orthogroups_2024-Update
Glyma.03G013300 No alias myb domain protein 17 0.02 Orthogroups_2024-Update
Glyma.08G042100 No alias myb domain protein 62 0.04 Orthogroups_2024-Update
Glyma.19G264200 No alias myb domain protein 78 0.04 Orthogroups_2024-Update
HORVU6Hr1G060650.6 No alias accessory protein (LMI2) of floral meristem identity control 0.03 Orthogroups_2024-Update
HORVU6Hr1G067380.1 No alias MYB class-R2R3 subgroup-3 transcription factor 0.03 Orthogroups_2024-Update
LOC_Os06g14670 No alias ODORANT1, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os06g46560 No alias myb-like DNA-binding domain containing protein, expressed 0.03 Orthogroups_2024-Update
MA_2797g0010 No alias (at4g38620 : 271.0) Encodes a R2R3 MYB protein which is... 0.03 Orthogroups_2024-Update
Potri.015G082700 No alias myb domain protein 50 0.02 Orthogroups_2024-Update
Potri.017G075000 No alias Duplicated homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Seita.8G057800.1 No alias MYB class-R2R3 subgroup-4 transcription factor 0.03 Orthogroups_2024-Update
Solyc06g071690 No alias R2R3MYB transcription factor 50 0.03 Orthogroups_2024-Update
Sopen08g027720 No alias Myb-like DNA-binding domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003774 motor activity IEP Predicted GO
MF GO:0003777 microtubule motor activity IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004601 peroxidase activity IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006928 movement of cell or subcellular component IEP Predicted GO
BP GO:0007017 microtubule-based process IEP Predicted GO
BP GO:0007018 microtubule-based movement IEP Predicted GO
MF GO:0008017 microtubule binding IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
BP GO:0016579 protein deubiquitination IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0070646 protein modification by small protein removal IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
MF GO:2001070 starch binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 118 161
IPR001005 SANT/Myb 65 112
No external refs found!