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  5. Seita.4G222600.1

Seita.4G222600.1


Description : cutin and suberin biosynthesis transcription factor *(SHN) & subgroup ERF-V transcription factor


Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G222600.1
Cluster HCAA Clusters: Cluster_77

Target Alias Description ECC score Gene Family Method Actions
38500 No alias Integrase-type DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
Brara.C04274.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
GRMZM2G139765 No alias Integrase-type DNA-binding superfamily protein 0.03 Orthogroups_2024-Update
Glyma.05G063600 No alias ethylene responsive element binding factor 1 0.04 Orthogroups_2024-Update
Glyma.13G060600 No alias related to AP2 11 0.03 Orthogroups_2024-Update
Glyma.18G252300 No alias ethylene-responsive element binding factor 13 0.03 Orthogroups_2024-Update
HORVU6Hr1G060140.1 No alias subgroup ERF-I transcription factor 0.03 Orthogroups_2024-Update
PSME_00056631-RA No alias (at5g21960 : 125.0) encodes a member of the DREB... 0.03 Orthogroups_2024-Update
Potri.010G072400 No alias Integrase-type DNA-binding superfamily protein 0.04 Orthogroups_2024-Update
Potri.013G158500 No alias cytokinin response factor 4 0.03 Orthogroups_2024-Update
Potri.015G023200 No alias cytokinin response factor 4 0.02 Orthogroups_2024-Update
Potri.017G087800 No alias related to AP2 11 0.04 Orthogroups_2024-Update
Seita.1G259000.1 No alias subgroup ERF-III transcription factor 0.03 Orthogroups_2024-Update
Seita.1G270800.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Seita.9G320700.1 No alias subgroup ERF-IX transcription factor 0.03 Orthogroups_2024-Update
Sobic.006G156100.1 No alias subgroup ERF-I transcription factor 0.04 Orthogroups_2024-Update
Solyc03g093610 No alias ethylene response factor A.2 0.02 Orthogroups_2024-Update
Solyc08g081960 No alias Solanum Lycopersicum Cytokinin Response Factor 2 0.03 Orthogroups_2024-Update
Sopen01g027380 No alias AP2 domain 0.02 Orthogroups_2024-Update
Sopen02g037700 No alias AP2 domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEA 16Dec
BP GO:0006355 regulation of transcription, DNA-templated IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0004252 serine-type endopeptidase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001471 AP2/ERF_dom 6 50
No external refs found!