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  5. At4g23540

At4g23540


Description : ARM repeat superfamily protein [Source:UniProtKB/TrEMBL;Acc:F4JNL5]


Gene families : OG_42_0003160 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0003160_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g23540
Cluster HCCA clusters: Cluster_56

Target Alias Description ECC score Gene Family Method Actions
Bradi2g61300 No alias ARM repeat superfamily protein 0.04 Orthogroups_2024-Update
Bradi3g60080 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
Glyma.02G184900 No alias ARM repeat superfamily protein 0.03 Orthogroups_2024-Update
HORVU3Hr1G110140.7 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU6Hr1G082320.4 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G082340.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Seita.5G459200.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Sopen04g007950 No alias NUC173 domain 0.02 Orthogroups_2024-Update
Sopen07g021980 No alias NUC173 domain 0.02 Orthogroups_2024-Update
evm.model.contig_2349.3 No alias (at2g34357 : 101.0) ARM repeat superfamily protein;... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0002097 tRNA wobble base modification IEP Predicted GO
BP GO:0002098 tRNA wobble uridine modification IEP Predicted GO
MF GO:0003697 single-stranded DNA binding IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006400 tRNA modification IEP Predicted GO
BP GO:0006813 potassium ion transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
CC GO:0009523 photosystem II IEP Predicted GO
CC GO:0009654 photosystem II oxygen evolving complex IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
CC GO:0019898 extrinsic component of membrane IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
CC GO:0033588 Elongator holoenzyme complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:1990204 oxidoreductase complex IEP Predicted GO
InterPro domains Description Start Stop
IPR012978 Uncharacterised_NUC173 408 606
No external refs found!