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  5. Seita.4G242000.1

Seita.4G242000.1


Description : ABC1 atypical protein kinase


Gene families : OG_42_0004286 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0004286_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G242000.1
Cluster HCAA Clusters: Cluster_197

Target Alias Description ECC score Gene Family Method Actions
439199 No alias ABC1 family protein 0.05 Orthogroups_2024-Update
Brara.F02688.1 No alias ABC1 atypical protein kinase 0.03 Orthogroups_2024-Update
Potri.018G003400 No alias ABC1 family protein 0.03 Orthogroups_2024-Update
Pp1s93_33V6 No alias T4C12.2; expressed protein [Arabidopsis thaliana] 0.02 Orthogroups_2024-Update
Sobic.010G251300.1 No alias ABC1 atypical protein kinase 0.07 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0036094 small molecule binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
InterPro domains Description Start Stop
IPR001466 Beta-lactam-related 490 771
IPR004147 UbiB_dom 89 340
No external refs found!