Seita.4G247100.1


Description : regulatory E3 ubiquitin ligase (MREL/JUL) of microtubule dynamics & RING-H2-class CTL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000181 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000181_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G247100.1
Cluster HCAA Clusters: Cluster_116

Target Alias Description ECC score Gene Family Method Actions
89607 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Brara.C01860.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Brara.D02257.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
Brara.F00132.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.04 Orthogroups_2024-Update
GRMZM2G061663 No alias RING/U-box superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G165044 No alias RING/U-box superfamily protein 0.05 Orthogroups_2024-Update
Glyma.06G234300 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Glyma.13G272700 No alias RING/U-box superfamily protein 0.02 Orthogroups_2024-Update
Glyma.19G180000 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
HORVU2Hr1G113930.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G018800.2 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
HORVU3Hr1G054900.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Potri.007G045500 No alias RING/U-box superfamily protein 0.04 Orthogroups_2024-Update
Potri.018G005600 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
Sobic.009G232800.1 No alias RING-H2-class CTL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
Solyc10g050170 No alias RING/U-box superfamily protein (AHRD V3.3 *** AT2G15530.7) 0.03 Orthogroups_2024-Update
Sopen03g037790 No alias Ring finger domain 0.04 Orthogroups_2024-Update
Sopen05g004600 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen08g002410 No alias Ring finger domain 0.02 Orthogroups_2024-Update
Sopen12g028740 No alias Ring finger domain 0.03 Orthogroups_2024-Update
evm.model.tig00000319.12 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence

Type GO Term Name Evidence Source
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
MF GO:0008107 galactoside 2-alpha-L-fucosyltransferase activity IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0030151 molybdenum ion binding IEP Predicted GO
MF GO:0031127 alpha-(1,2)-fucosyltransferase activity IEP Predicted GO
BP GO:0042546 cell wall biogenesis IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0051260 protein homooligomerization IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 525 567
No external refs found!