Seita.4G253400.1


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G253400.1
Cluster HCAA Clusters: Cluster_257

Target Alias Description ECC score Gene Family Method Actions
270468 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
271198 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
271419 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
At1g53930 No alias F15I1.1 protein [Source:UniProtKB/TrEMBL;Acc:Q9SYE9] 0.03 Orthogroups_2024-Update
At4g02890 No alias Polyubiquitin 14 [Source:UniProtKB/Swiss-Prot;Acc:Q3E7T8] 0.05 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Bradi1g32860 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Brara.G00545.1 No alias RUB ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Glyma.10G051100 No alias ubiquitin 4 0.03 Orthogroups_2024-Update
Glyma.13G117900 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
HORVU5Hr1G019600.6 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G014970.1 No alias Unknown function 0.04 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G026200.5 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G026280.2 No alias Unknown function 0.03 Orthogroups_2024-Update
LOC_Os07g30640 No alias ubiquitin fusion protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g27930 No alias ubiquitin fusion protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
MA_94077g0010 No alias (at5g03240 : 515.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
Mp2g17420.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Mp4g02740.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Mp6g03960.1 No alias ubiquitin-fold protein (UBQ) 0.03 Orthogroups_2024-Update
Potri.001G025300 No alias ubiquitin 6 0.04 Orthogroups_2024-Update
Potri.011G134200 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Pp1s100_236V6 No alias T8F5.13; polyubiquitin, putative [Arabidopsis thaliana] 0.03 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.02 Orthogroups_2024-Update
Pp1s32_16V6 No alias ubiquitin fusion protein 0.03 Orthogroups_2024-Update
Pp1s4_496V6 No alias No description available 0.03 Orthogroups_2024-Update
Sobic.002G292500.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.004G049900.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
Sobic.010G225300.2 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Type GO Term Name Evidence Source
MF GO:0004497 monooxygenase activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
MF GO:0005506 iron ion binding IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0016491 oxidoreductase activity IEP Predicted GO
MF GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen IEP Predicted GO
MF GO:0032553 ribonucleotide binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0097367 carbohydrate derivative binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 69 140
IPR000626 Ubiquitin_dom 41 64
IPR000626 Ubiquitin_dom 3 38
No external refs found!