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At4g23820


Description : Pectin lyase-like superfamily protein [Source:UniProtKB/TrEMBL;Acc:Q9SUP5]


Gene families : OG_42_0000259 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000259_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Arabidopsis release: At4g23820
Cluster HCCA clusters: Cluster_4

Target Alias Description ECC score Gene Family Method Actions
A4A49_18383 No alias putative polygalacturonase 0.05 Orthogroups_2024-Update
At3g61490 No alias Pectin lyase-like superfamily protein... 0.03 Orthogroups_2024-Update
Bradi1g52050 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Glyma.09G132100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.10G016100 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.19G213400 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
LOC_Os03g03350 No alias polygalacturonase, putative, expressed 0.03 Orthogroups_2024-Update
Potri.003G139100 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Potri.006G139500 No alias Pectin lyase-like superfamily protein 0.03 Orthogroups_2024-Update
Potri.007G105800 No alias Pectin lyase-like superfamily protein 0.04 Orthogroups_2024-Update
Seita.4G004900.1 No alias EC_3.2 glycosylase 0.02 Orthogroups_2024-Update
Sobic.003G223100.1 No alias EC_3.2 glycosylase 0.04 Orthogroups_2024-Update
Sopen03g036660 No alias Glycosyl hydrolases family 28 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004650 polygalacturonase activity IEA InterProScan predictions
BP GO:0005975 carbohydrate metabolic process IEA InterProScan predictions
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Type GO Term Name Evidence Source
BP GO:0000079 regulation of cyclin-dependent protein serine/threonine kinase activity IEP Predicted GO
BP GO:0001932 regulation of protein phosphorylation IEP Predicted GO
MF GO:0005096 GTPase activator activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006413 translational initiation IEP Predicted GO
BP GO:0006629 lipid metabolic process IEP Predicted GO
MF GO:0008047 enzyme activator activity IEP Predicted GO
BP GO:0008654 phospholipid biosynthetic process IEP Predicted GO
BP GO:0009312 oligosaccharide biosynthetic process IEP Predicted GO
CC GO:0016021 integral component of membrane IEP Predicted GO
MF GO:0016717 oxidoreductase activity, acting on paired donors, with oxidation of a pair of donors resulting in the reduction of molecular oxygen to two molecules of water IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016780 phosphotransferase activity, for other substituted phosphate groups IEP Predicted GO
BP GO:0019220 regulation of phosphate metabolic process IEP Predicted GO
MF GO:0019900 kinase binding IEP Predicted GO
MF GO:0019901 protein kinase binding IEP Predicted GO
MF GO:0030695 GTPase regulator activity IEP Predicted GO
CC GO:0031224 intrinsic component of membrane IEP Predicted GO
CC GO:0031225 anchored component of membrane IEP Predicted GO
CC GO:0031226 intrinsic component of plasma membrane IEP Predicted GO
BP GO:0031399 regulation of protein modification process IEP Predicted GO
BP GO:0032268 regulation of cellular protein metabolic process IEP Predicted GO
BP GO:0042325 regulation of phosphorylation IEP Predicted GO
BP GO:0043549 regulation of kinase activity IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
BP GO:0045859 regulation of protein kinase activity IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
CC GO:0046658 anchored component of plasma membrane IEP Predicted GO
BP GO:0050790 regulation of catalytic activity IEP Predicted GO
BP GO:0051174 regulation of phosphorus metabolic process IEP Predicted GO
BP GO:0051246 regulation of protein metabolic process IEP Predicted GO
BP GO:0051338 regulation of transferase activity IEP Predicted GO
BP GO:0051726 regulation of cell cycle IEP Predicted GO
BP GO:0065009 regulation of molecular function IEP Predicted GO
BP GO:0071900 regulation of protein serine/threonine kinase activity IEP Predicted GO
BP GO:1904029 regulation of cyclin-dependent protein kinase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000743 Glyco_hydro_28 137 417
No external refs found!