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  5. Seita.4G257500.1

Seita.4G257500.1


Description : membrane tethering protein (SYT1) of ER-cytoskeleton-plasmamembrane interface


Gene families : OG_42_0000345 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000345_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G257500.1
Cluster HCAA Clusters: Cluster_26

Target Alias Description ECC score Gene Family Method Actions
Brara.D00127.1 No alias Unknown function 0.02 Orthogroups_2024-Update
HORVU5Hr1G084020.3 No alias Unknown function 0.06 Orthogroups_2024-Update
Sobic.001G005100.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Solyc01g094030 No alias CLB1 0.02 Orthogroups_2024-Update
Sopen12g004680 No alias C2 domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0005507 copper ion binding IEP Predicted GO
InterPro domains Description Start Stop
IPR000008 C2_dom 421 521
IPR000008 C2_dom 259 352
IPR039010 Synaptotagmin_SMP 65 246
No external refs found!