Seita.4G259900.1


Description : UBQ ubiquitin-fold protein


Gene families : OG_42_0000048 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000048_tree

Sequence : coding (download), protein (download)


Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G259900.1
Cluster HCAA Clusters: Cluster_35

Target Alias Description ECC score Gene Family Method Actions
At5g09340 No alias Ubiquitin family protein [Source:UniProtKB/TrEMBL;Acc:Q9FY81] 0.02 Orthogroups_2024-Update
Bradi1g32460 No alias polyubiquitin 10 0.02 Orthogroups_2024-Update
Bradi1g32860 No alias polyubiquitin 10 0.03 Orthogroups_2024-Update
Bradi3g03957 No alias polyubiquitin 3 0.04 Orthogroups_2024-Update
Brara.E00879.1 No alias RUB ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Brara.J02833.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU5Hr1G019590.12 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU5Hr1G019600.6 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
HORVU6Hr1G014970.1 No alias Unknown function 0.05 Orthogroups_2024-Update
HORVU6Hr1G016150.3 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G020140.6 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G021700.4 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
HORVU6Hr1G026200.5 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
HORVU6Hr1G026260.1 No alias UBQ ubiquitin-fold protein 0.05 Orthogroups_2024-Update
HORVU7Hr1G103330.1 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
LOC_Os09g27930 No alias ubiquitin fusion protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os09g31019 No alias ubiquitin fusion protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_100402g0010 No alias (at4g02890 : 582.0) Polyubiquitin gene containing 4... 0.04 Orthogroups_2024-Update
MA_10430977g0010 No alias (at5g03240 : 285.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
MA_13121g0010 No alias (at5g03240 : 264.0) encodes ubiquitin that is attached... 0.03 Orthogroups_2024-Update
MA_369963g0010 No alias (at5g03240 : 444.0) encodes ubiquitin that is attached... 0.02 Orthogroups_2024-Update
MA_9129425g0010 No alias (at3g52590 : 191.0) Ubiquitin extension protein;... 0.03 Orthogroups_2024-Update
Mp4g02730.1 No alias ubiquitin-fold protein (UBQ) 0.03 Orthogroups_2024-Update
Mp6g03960.1 No alias ubiquitin-fold protein (UBQ) 0.02 Orthogroups_2024-Update
Potri.011G026600 No alias polyubiquitin 3 0.03 Orthogroups_2024-Update
Potri.011G134200 No alias polyubiquitin 10 0.04 Orthogroups_2024-Update
Pp1s129_28V6 No alias Putative polyubiquitin 0.03 Orthogroups_2024-Update
Pp1s175_73V6 No alias polyubiquitin 0.05 Orthogroups_2024-Update
Seita.1G078900.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.3G398300.1 No alias Unknown function 0.05 Orthogroups_2024-Update
Seita.4G265000.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Seita.5G081000.1 No alias UBQ ubiquitin-fold protein 0.04 Orthogroups_2024-Update
Sobic.002G178700.2 No alias Unknown function 0.01 Orthogroups_2024-Update
Sobic.002G308900.1 No alias component *(eL40) of large ribosomal-subunit (LSU) proteome 0.02 Orthogroups_2024-Update
Sobic.010G223600.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G225300.2 No alias UBQ ubiquitin-fold protein 0.02 Orthogroups_2024-Update
Sobic.010G232100.1 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sobic.010G239500.6 No alias UBQ ubiquitin-fold protein 0.03 Orthogroups_2024-Update
Sopen11g001600 No alias Ubiquitin family 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
Type GO Term Name Evidence Source
BP GO:0000160 phosphorelay signal transduction system IEP Predicted GO
BP GO:0000272 polysaccharide catabolic process IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
CC GO:0005856 cytoskeleton IEP Predicted GO
BP GO:0007034 vacuolar transport IEP Predicted GO
MF GO:0010309 acireductone dioxygenase [iron(II)-requiring] activity IEP Predicted GO
MF GO:0016161 beta-amylase activity IEP Predicted GO
BP GO:0035556 intracellular signal transduction IEP Predicted GO
MF GO:0043531 ADP binding IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000626 Ubiquitin_dom 256 327
IPR000626 Ubiquitin_dom 28 99
IPR000626 Ubiquitin_dom 104 175
IPR000626 Ubiquitin_dom 180 251
IPR000626 Ubiquitin_dom 332 403
No external refs found!