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  5. Seita.4G260000.1

Seita.4G260000.1


Description : GTPase effector *(RIC)


Gene families : OG_42_0000477 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000477_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G260000.1
Cluster HCAA Clusters: Cluster_156

Target Alias Description ECC score Gene Family Method Actions
At2g33460 No alias CRIB domain-containing protein RIC1... 0.03 Orthogroups_2024-Update
Bradi3g15340 No alias PAK-box/P21-Rho-binding family protein 0.03 Orthogroups_2024-Update
Brara.K00764.1 No alias GTPase effector *(RIC) 0.05 Orthogroups_2024-Update
Glyma.09G250900 No alias ROP-interactive CRIB motif-containing protein 4 0.06 Orthogroups_2024-Update
HORVU6Hr1G026330.5 No alias GTPase effector *(RIC) 0.04 Orthogroups_2024-Update
LOC_Os07g26480 No alias P21-Rho-binding domain containing protein, putative, expressed 0.02 Orthogroups_2024-Update
Pp1s46_87V6 No alias No description available 0.03 Orthogroups_2024-Update
Sobic.007G065000.1 No alias GTPase effector *(RIC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000723 telomere maintenance IEP Predicted GO
MF GO:0003678 DNA helicase activity IEP Predicted GO
MF GO:0004866 endopeptidase inhibitor activity IEP Predicted GO
MF GO:0004869 cysteine-type endopeptidase inhibitor activity IEP Predicted GO
MF GO:0005216 ion channel activity IEP Predicted GO
MF GO:0015267 channel activity IEP Predicted GO
MF GO:0015276 ligand-gated ion channel activity IEP Predicted GO
MF GO:0022803 passive transmembrane transporter activity IEP Predicted GO
MF GO:0022834 ligand-gated channel activity IEP Predicted GO
MF GO:0022836 gated channel activity IEP Predicted GO
MF GO:0022838 substrate-specific channel activity IEP Predicted GO
MF GO:0022839 ion gated channel activity IEP Predicted GO
MF GO:0030414 peptidase inhibitor activity IEP Predicted GO
BP GO:0032200 telomere organization IEP Predicted GO
BP GO:0042592 homeostatic process IEP Predicted GO
MF GO:0050660 flavin adenine dinucleotide binding IEP Predicted GO
BP GO:0060249 anatomical structure homeostasis IEP Predicted GO
MF GO:0061134 peptidase regulator activity IEP Predicted GO
MF GO:0061135 endopeptidase regulator activity IEP Predicted GO
InterPro domains Description Start Stop
IPR000095 CRIB_dom 28 59
No external refs found!