1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G266700.1

Seita.4G266700.1


Description : deubiquitinase *(OTU6-12)


Gene families : OG_42_0000871 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000871_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G266700.1
Cluster HCAA Clusters: Cluster_195

Target Alias Description ECC score Gene Family Method Actions
Bradi1g32340 No alias Cysteine proteinases superfamily protein 0.03 Orthogroups_2024-Update
Bradi1g72850 No alias Cysteine proteinases superfamily protein 0.03 Orthogroups_2024-Update
Brara.C00154.1 No alias deubiquitinase *(OTU6-12) 0.03 Orthogroups_2024-Update
Brara.J02824.1 No alias deubiquitinase *(OTU6-12) 0.03 Orthogroups_2024-Update
Cre09.g392250 No alias Cysteine proteinases superfamily protein 0.02 Orthogroups_2024-Update
Sobic.001G003000.1 No alias deubiquitinase *(OTU6-12) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003684 damaged DNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004649 poly(ADP-ribose) glycohydrolase activity IEP Predicted GO
BP GO:0006282 regulation of DNA repair IEP Predicted GO
BP GO:0006486 protein glycosylation IEP Predicted GO
BP GO:0006950 response to stress IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0035673 oligopeptide transmembrane transporter activity IEP Predicted GO
MF GO:0042887 amide transmembrane transporter activity IEP Predicted GO
BP GO:0043413 macromolecule glycosylation IEP Predicted GO
MF GO:0047429 nucleoside-triphosphate diphosphatase activity IEP Predicted GO
BP GO:0048583 regulation of response to stimulus IEP Predicted GO
BP GO:0051052 regulation of DNA metabolic process IEP Predicted GO
BP GO:0070085 glycosylation IEP Predicted GO
BP GO:0080134 regulation of response to stress IEP Predicted GO
BP GO:0080135 regulation of cellular response to stress IEP Predicted GO
MF GO:1904680 peptide transmembrane transporter activity IEP Predicted GO
BP GO:2001020 regulation of response to DNA damage stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR003323 OTU_dom 95 184
No external refs found!