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  5. Seita.4G266800.1

Seita.4G266800.1


Description : circadian clock factor *(REVEILLE) & transcription factor *(REVEILLE)


Gene families : OG_42_0000380 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000380_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G266800.1
Cluster HCAA Clusters: Cluster_93

Target Alias Description ECC score Gene Family Method Actions
421179 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
At1g18330 No alias Protein REVEILLE 7 [Source:UniProtKB/Swiss-Prot;Acc:B3H5A8] 0.03 Orthogroups_2024-Update
At4g01280 No alias Protein REVEILLE 5 [Source:UniProtKB/Swiss-Prot;Acc:C0SVG5] 0.04 Orthogroups_2024-Update
At5g37260 No alias Protein REVEILLE 2 [Source:UniProtKB/Swiss-Prot;Acc:F4K5X6] 0.02 Orthogroups_2024-Update
Brara.C00761.1 No alias transcription factor *(REVEILLE) 0.02 Orthogroups_2024-Update
Brara.J00790.1 No alias circadian clock factor *(REVEILLE) & transcription... 0.03 Orthogroups_2024-Update
Glyma.09G131400 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.16G032600 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Glyma.18G237700 No alias Homeodomain-like superfamily protein 0.04 Orthogroups_2024-Update
LOC_Os02g45670 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g01670 No alias myb-like DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
LOC_Os06g51260 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
MA_115536g0010 No alias (at1g01060 : 122.0) LHY encodes a myb-related putative... 0.02 Orthogroups_2024-Update
Potri.002G163100 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.006G133000 No alias Homeodomain-like superfamily protein 0.02 Orthogroups_2024-Update
Potri.017G144800 No alias Homeodomain-like superfamily protein 0.03 Orthogroups_2024-Update
Solyc03g098320 No alias Myb transcription factor (AHRD V3.3 *** A0A072UBN0_MEDTR) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0006813 potassium ion transport IEP Predicted GO
MF GO:0015079 potassium ion transmembrane transporter activity IEP Predicted GO
BP GO:0071805 potassium ion transmembrane transport IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 81 126
No external refs found!