1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.4G268900.1

Seita.4G268900.1


Description : Unknown function


Gene families : OG_42_0000723 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000723_tree

Sequence : coding (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G268900.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
419311 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
A4A49_01920 No alias vq motif-containing protein 22 0.03 Orthogroups_2024-Update
A4A49_04111 No alias hypothetical protein 0.03 Orthogroups_2024-Update
A4A49_40268 No alias vq motif-containing protein 22 0.04 Orthogroups_2024-Update
AC207043.3_FG002 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Brara.A00045.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Brara.A02742.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.E02012.1 No alias Unknown function 0.03 Orthogroups_2024-Update
GRMZM2G126413 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
GRMZM2G333049 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
GRMZM2G420715 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
Glyma.04G103300 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Glyma.06G104400 No alias VQ motif-containing protein 0.03 Orthogroups_2024-Update
Glyma.14G002800 No alias VQ motif-containing protein 0.04 Orthogroups_2024-Update
Glyma.15G158200 No alias VQ motif-containing protein 0.04 Orthogroups_2024-Update
LOC_Os02g07690 No alias VQ domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os06g45570 No alias VQ domain containing protein, putative, expressed 0.05 Orthogroups_2024-Update
LOC_Os08g31660 No alias VQ domain containing protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10430864g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_77606g0010 No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
MA_79595g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
MA_84113g0010 No alias no hits & (original description: no original description) 0.06 Orthogroups_2024-Update
PSME_00043483-RA No alias no hits & (original description: no original description) 0.02 Orthogroups_2024-Update
Potri.001G158800 No alias VQ motif-containing protein 0.06 Orthogroups_2024-Update
Potri.003G075800 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
Potri.005G166100 No alias VQ motif-containing protein 0.02 Orthogroups_2024-Update
Potri.006G006300 No alias VQ motif-containing protein 0.08 Orthogroups_2024-Update
Potri.016G017900 No alias VQ motif-containing protein 0.05 Orthogroups_2024-Update
Seita.9G381000.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Sobic.002G185200.2 No alias Unknown function 0.08 Orthogroups_2024-Update
Sobic.004G058000.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Sobic.010G221032.1 No alias Unknown function 0.09 Orthogroups_2024-Update
Solyc02g068460 No alias LOW QUALITY:VQ motif-containing protein, putative (AHRD... 0.04 Orthogroups_2024-Update
Solyc07g043250 No alias LOW QUALITY:VQ motif-containing protein, putative (AHRD... 0.02 Orthogroups_2024-Update
Sopen02g010250 No alias VQ motif 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003677 DNA binding IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0003872 6-phosphofructokinase activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004556 alpha-amylase activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006082 organic acid metabolic process IEP Predicted GO
BP GO:0006355 regulation of transcription, DNA-templated IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006631 fatty acid metabolic process IEP Predicted GO
BP GO:0006633 fatty acid biosynthetic process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0008150 biological_process IEP Predicted GO
MF GO:0008443 phosphofructokinase activity IEP Predicted GO
BP GO:0008610 lipid biosynthetic process IEP Predicted GO
BP GO:0009889 regulation of biosynthetic process IEP Predicted GO
BP GO:0010468 regulation of gene expression IEP Predicted GO
BP GO:0010556 regulation of macromolecule biosynthetic process IEP Predicted GO
BP GO:0016053 organic acid biosynthetic process IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016746 transferase activity, transferring acyl groups IEP Predicted GO
MF GO:0016747 transferase activity, transferring acyl groups other than amino-acyl groups IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0017076 purine nucleotide binding IEP Predicted GO
MF GO:0019200 carbohydrate kinase activity IEP Predicted GO
BP GO:0019219 regulation of nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0019222 regulation of metabolic process IEP Predicted GO
BP GO:0019752 carboxylic acid metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030554 adenyl nucleotide binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0031323 regulation of cellular metabolic process IEP Predicted GO
BP GO:0031326 regulation of cellular biosynthetic process IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
MF GO:0032555 purine ribonucleotide binding IEP Predicted GO
MF GO:0032559 adenyl ribonucleotide binding IEP Predicted GO
BP GO:0032787 monocarboxylic acid metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
MF GO:0043167 ion binding IEP Predicted GO
MF GO:0043168 anion binding IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0043436 oxoacid metabolic process IEP Predicted GO
MF GO:0043565 sequence-specific DNA binding IEP Predicted GO
BP GO:0044255 cellular lipid metabolic process IEP Predicted GO
BP GO:0044283 small molecule biosynthetic process IEP Predicted GO
BP GO:0046394 carboxylic acid biosynthetic process IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0050794 regulation of cellular process IEP Predicted GO
BP GO:0051171 regulation of nitrogen compound metabolic process IEP Predicted GO
BP GO:0051252 regulation of RNA metabolic process IEP Predicted GO
BP GO:0060255 regulation of macromolecule metabolic process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0072330 monocarboxylic acid biosynthetic process IEP Predicted GO
BP GO:0080090 regulation of primary metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO
BP GO:1903506 regulation of nucleic acid-templated transcription IEP Predicted GO
BP GO:2000112 regulation of cellular macromolecule biosynthetic process IEP Predicted GO
BP GO:2001141 regulation of RNA biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR008889 VQ 90 117
No external refs found!