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  5. Seita.4G275800.1

Seita.4G275800.1


Description : Unknown function


Gene families : OG_42_0000573 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000573_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G275800.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
At3g03480 No alias (Z)-3-hexen-1-ol acetyltransferase... 0.02 Orthogroups_2024-Update
Brara.E03508.1 No alias Unknown function 0.02 Orthogroups_2024-Update
GRMZM2G050450 No alias HXXXD-type acyl-transferase family protein 0.04 Orthogroups_2024-Update
GRMZM2G122503 No alias HXXXD-type acyl-transferase family protein 0.03 Orthogroups_2024-Update
LOC_Os10g04429 No alias transferase family protein, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os11g16680 No alias transferase family protein, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os12g27330 No alias transferase family protein, putative, expressed 0.03 Orthogroups_2024-Update
MA_10437195g0010 No alias (at5g17540 : 327.0) HXXXD-type acyl-transferase family... 0.03 Orthogroups_2024-Update
MA_9429908g0010 No alias (at5g17540 : 155.0) HXXXD-type acyl-transferase family... 0.03 Orthogroups_2024-Update
PSME_00026277-RA No alias (at5g17540 : 231.0) HXXXD-type acyl-transferase family... 0.02 Orthogroups_2024-Update
Seita.3G056600.1 No alias EC_2.3 acyltransferase 0.03 Orthogroups_2024-Update
Sobic.010G259500.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Solyc07g049670 No alias Benzyl alcohol O-benzoyltransferase (AHRD V3.3 *** BEBT_TOBAC) 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000062 fatty-acyl-CoA binding IEP Predicted GO
CC GO:0000439 transcription factor TFIIH core complex IEP Predicted GO
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004674 protein serine/threonine kinase activity IEP Predicted GO
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0006289 nucleotide-excision repair IEP Predicted GO
BP GO:0006352 DNA-templated transcription, initiation IEP Predicted GO
BP GO:0006367 transcription initiation from RNA polymerase II promoter IEP Predicted GO
MF GO:0010181 FMN binding IEP Predicted GO
MF GO:0033218 amide binding IEP Predicted GO
CC GO:0044798 nuclear transcription factor complex IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
CC GO:0090575 RNA polymerase II transcription factor complex IEP Predicted GO
MF GO:0140110 transcription regulator activity IEP Predicted GO
MF GO:1901567 fatty acid derivative binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!