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  5. Seita.4G287700.1

Seita.4G287700.1


Description : component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex


Gene families : OG_42_0001824 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001824_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G287700.1
Cluster HCAA Clusters: Cluster_60

Target Alias Description ECC score Gene Family Method Actions
Bradi1g29690 No alias Calcium-binding EF hand family protein 0.04 Orthogroups_2024-Update
Glyma.06G016700 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
HORVU4Hr1G082280.2 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex 0.03 Orthogroups_2024-Update
HORVU7Hr1G121230.4 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex 0.03 Orthogroups_2024-Update
Kfl00218_0010 kfl00218_0010_v1.1 (at1g21630 : 119.0) Calcium-binding EF hand family... 0.02 Orthogroups_2024-Update
Kfl00218_0020 kfl00218_0020_v1.1 (at1g21630 : 149.0) Calcium-binding EF hand family... 0.04 Orthogroups_2024-Update
MA_10434216g0010 No alias (at1g21630 : 380.0) Calcium-binding EF hand family... 0.04 Orthogroups_2024-Update
PSME_00028035-RA No alias (at1g20760 : 553.0) Calcium-binding EF hand family... 0.02 Orthogroups_2024-Update
Potri.005G253000 No alias Calcium-binding EF hand family protein 0.03 Orthogroups_2024-Update
Pp1s22_272V6 No alias calcium ion binding 0.03 Orthogroups_2024-Update
Sobic.001G518400.1 No alias component *(EH1/EH2) of TPLATE AP-2 co-adaptor complex 0.04 Orthogroups_2024-Update
Sopen02g012560 No alias Cytoskeletal-regulatory complex EF hand 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005509 calcium ion binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0000278 mitotic cell cycle IEP Predicted GO
CC GO:0000775 chromosome, centromeric region IEP Predicted GO
BP GO:0006810 transport IEP Predicted GO
BP GO:0006886 intracellular protein transport IEP Predicted GO
BP GO:0006888 ER to Golgi vesicle-mediated transport IEP Predicted GO
BP GO:0007049 cell cycle IEP Predicted GO
BP GO:0008104 protein localization IEP Predicted GO
BP GO:0015031 protein transport IEP Predicted GO
BP GO:0015833 peptide transport IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
CC GO:0016459 myosin complex IEP Predicted GO
CC GO:0030117 membrane coat IEP Predicted GO
CC GO:0030118 clathrin coat IEP Predicted GO
CC GO:0030120 vesicle coat IEP Predicted GO
CC GO:0030125 clathrin vesicle coat IEP Predicted GO
CC GO:0030127 COPII vesicle coat IEP Predicted GO
CC GO:0030130 clathrin coat of trans-Golgi network vesicle IEP Predicted GO
CC GO:0030132 clathrin coat of coated pit IEP Predicted GO
CC GO:0032991 protein-containing complex IEP Predicted GO
BP GO:0033036 macromolecule localization IEP Predicted GO
BP GO:0042886 amide transport IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044424 intracellular part IEP Predicted GO
CC GO:0044425 membrane part IEP Predicted GO
CC GO:0044427 chromosomal part IEP Predicted GO
CC GO:0044430 cytoskeletal part IEP Predicted GO
CC GO:0044431 Golgi apparatus part IEP Predicted GO
CC GO:0044433 cytoplasmic vesicle part IEP Predicted GO
CC GO:0044444 cytoplasmic part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044459 plasma membrane part IEP Predicted GO
CC GO:0044464 cell part IEP Predicted GO
BP GO:0045184 establishment of protein localization IEP Predicted GO
BP GO:0046907 intracellular transport IEP Predicted GO
BP GO:0048193 Golgi vesicle transport IEP Predicted GO
BP GO:0051179 localization IEP Predicted GO
BP GO:0051234 establishment of localization IEP Predicted GO
BP GO:0051641 cellular localization IEP Predicted GO
BP GO:0051649 establishment of localization in cell IEP Predicted GO
BP GO:0071702 organic substance transport IEP Predicted GO
BP GO:0071705 nitrogen compound transport IEP Predicted GO
CC GO:0098687 chromosomal region IEP Predicted GO
CC GO:0098796 membrane protein complex IEP Predicted GO
CC GO:0098797 plasma membrane protein complex IEP Predicted GO
InterPro domains Description Start Stop
IPR000261 EH_dom 380 466
IPR002048 EF_hand_dom 6 24
No external refs found!