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  5. Seita.4G288400.1

Seita.4G288400.1


Description : RING-H2-class ATL-subclass E3 ubiquitin ligase


Gene families : OG_42_0000003 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.4G288400.1
Cluster HCAA Clusters: Cluster_180

Target Alias Description ECC score Gene Family Method Actions
96631 No alias RING/U-box superfamily protein 0.03 Orthogroups_2024-Update
A4A49_07471 No alias ring-h2 finger protein atl70 0.04 Orthogroups_2024-Update
At4g35480 No alias RHA3B [Source:UniProtKB/TrEMBL;Acc:A0A178UXS9] 0.03 Orthogroups_2024-Update
Brara.H00318.1 No alias RING-H2-class ATL-subclass E3 ubiquitin ligase 0.03 Orthogroups_2024-Update
MA_7333826g0010 No alias no hits & (original description: no original description) 0.03 Orthogroups_2024-Update
Sopen06g022910 No alias Ring finger domain 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
CC GO:0005667 transcription factor complex IEP Predicted GO
BP GO:0022607 cellular component assembly IEP Predicted GO
BP GO:0043933 protein-containing complex subunit organization IEP Predicted GO
BP GO:0051259 protein complex oligomerization IEP Predicted GO
BP GO:0065003 protein-containing complex assembly IEP Predicted GO
InterPro domains Description Start Stop
IPR001841 Znf_RING 106 149
No external refs found!