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  5. Seita.5G004100.1

Seita.5G004100.1


Description : NLP-type transcription factor & nitrate response transcription factor *(NLP6/7) & transcription factor *(NIN)


Gene families : OG_42_0000432 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000432_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G004100.1
Cluster HCAA Clusters: Cluster_164

Target Alias Description ECC score Gene Family Method Actions
At1g20640 No alias Protein NLP4 [Source:UniProtKB/Swiss-Prot;Acc:Q9LE38] 0.02 Orthogroups_2024-Update
At1g64530 No alias Protein NLP6 [Source:UniProtKB/Swiss-Prot;Acc:Q8RWY4] 0.02 Orthogroups_2024-Update
At2g43500 No alias Plant regulator RWP-RK family protein [Source:TAIR;Acc:AT2G43500] 0.02 Orthogroups_2024-Update
At4g35270 No alias Protein NLP2 [Source:UniProtKB/Swiss-Prot;Acc:Q7X9B9] 0.03 Orthogroups_2024-Update
Bradi1g76340 No alias Plant regulator RWP-RK family protein 0.02 Orthogroups_2024-Update
Brara.A00305.1 No alias transcription factor *(NIN) & NLP-type transcription factor 0.03 Orthogroups_2024-Update
Brara.F01471.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.04 Orthogroups_2024-Update
Brara.G03430.1 No alias NLP-type transcription factor & transcription factor *(NIN) 0.03 Orthogroups_2024-Update
Glyma.10G234100 No alias Plant regulator RWP-RK family protein 0.03 Orthogroups_2024-Update
HORVU2Hr1G085590.5 No alias NLP-type transcription factor & transcription factor *(NIN) 0.02 Orthogroups_2024-Update
Sobic.003G003600.1 No alias NLP-type transcription factor & nitrate response... 0.04 Orthogroups_2024-Update
Solyc04g082480 No alias Plant regulator RWP-RK family protein, putative (AHRD... 0.04 Orthogroups_2024-Update
Sopen08g004270 No alias RWP-RK domain 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0000155 phosphorelay sensor kinase activity IEP Predicted GO
CC GO:0000786 nucleosome IEP Predicted GO
MF GO:0004673 protein histidine kinase activity IEP Predicted GO
BP GO:0005991 trehalose metabolic process IEP Predicted GO
BP GO:0005992 trehalose biosynthetic process IEP Predicted GO
BP GO:0006325 chromatin organization IEP Predicted GO
BP GO:0006334 nucleosome assembly IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
MF GO:0016775 phosphotransferase activity, nitrogenous group as acceptor IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
CC GO:0032993 protein-DNA complex IEP Predicted GO
BP GO:0034728 nucleosome organization IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
CC GO:0044815 DNA packaging complex IEP Predicted GO
BP GO:0046351 disaccharide biosynthetic process IEP Predicted GO
BP GO:0065004 protein-DNA complex assembly IEP Predicted GO
BP GO:0071824 protein-DNA complex subunit organization IEP Predicted GO
MF GO:0071949 FAD binding IEP Predicted GO
InterPro domains Description Start Stop
IPR003035 RWP-RK_dom 591 639
IPR000270 PB1_dom 841 921
No external refs found!