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  5. Seita.5G007500.1

Seita.5G007500.1


Description : tonoplast intrinsic protein *(TIP)


Gene families : OG_42_0000183 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000183_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G007500.1
Cluster HCAA Clusters: Cluster_87

Target Alias Description ECC score Gene Family Method Actions
165035 No alias tonoplast intrinsic protein 2;3 0.03 Orthogroups_2024-Update
Bradi2g31800 No alias tonoplast intrinsic protein 4;1 0.03 Orthogroups_2024-Update
Bradi2g62520 No alias tonoplast intrinsic protein 1;3 0.03 Orthogroups_2024-Update
MA_175978g0010 No alias (at2g36830 : 337.0) Encodes a tonoplast intrinsic... 0.02 Orthogroups_2024-Update
MA_467865g0010 No alias (at3g16240 : 316.0) Delta tonoplast intrinsic protein,... 0.02 Orthogroups_2024-Update
PSME_00009069-RA No alias (at2g36830 : 317.0) Encodes a tonoplast intrinsic... 0.02 Orthogroups_2024-Update
PSME_00009073-RA No alias (at2g36830 : 306.0) Encodes a tonoplast intrinsic... 0.03 Orthogroups_2024-Update
Potri.003G050900 No alias delta tonoplast integral protein 0.03 Orthogroups_2024-Update
Seita.5G452400.1 No alias tonoplast intrinsic protein *(TIP) 0.03 Orthogroups_2024-Update
Sobic.009G085900.1 No alias tonoplast intrinsic protein *(TIP) 0.04 Orthogroups_2024-Update
Sopen12g022600 No alias Major intrinsic protein 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0015267 channel activity IEA 16Dec
CC GO:0016020 membrane IEA 16Dec
BP GO:0055085 transmembrane transport IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006536 glutamate metabolic process IEP Predicted GO
BP GO:0006537 glutamate biosynthetic process IEP Predicted GO
BP GO:0009064 glutamine family amino acid metabolic process IEP Predicted GO
BP GO:0009084 glutamine family amino acid biosynthetic process IEP Predicted GO
MF GO:0015930 glutamate synthase activity IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
BP GO:0043648 dicarboxylic acid metabolic process IEP Predicted GO
BP GO:0043650 dicarboxylic acid biosynthetic process IEP Predicted GO
MF GO:0044183 protein binding involved in protein folding IEP Predicted GO
BP GO:0110102 chloroplast ribulose bisphosphate carboxylase complex assembly IEP Predicted GO
BP GO:1901607 alpha-amino acid biosynthetic process IEP Predicted GO
InterPro domains Description Start Stop
IPR000425 MIP 16 230
No external refs found!