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  5. Seita.5G043800.1

Seita.5G043800.1


Description : MYB class-R2R3 subgroup-21 transcription factor


Gene families : OG_42_0000047 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000047_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G043800.1
Cluster HCAA Clusters: Cluster_241

Target Alias Description ECC score Gene Family Method Actions
A4A49_10535 No alias myb-related protein 3r-1 0.04 Orthogroups_2024-Update
A4A49_13868 No alias myb-related protein 3r-1 0.04 Orthogroups_2024-Update
A4A49_23394 No alias transcription factor myb44 0.03 Orthogroups_2024-Update
A4A49_29942 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
A4A49_38114 No alias transcription factor myb44 0.04 Orthogroups_2024-Update
AC213884.3_FG002 No alias myb domain protein 73 0.02 Orthogroups_2024-Update
At3g09370 No alias Myb domain protein 3r-3 [Source:UniProtKB/TrEMBL;Acc:A0A1I9LSC6] 0.03 Orthogroups_2024-Update
At3g29020 No alias Myb domain protein 110 [Source:UniProtKB/TrEMBL;Acc:F4J1R5] 0.03 Orthogroups_2024-Update
At5g40360 No alias Transcription factor MYB115... 0.03 Orthogroups_2024-Update
Brara.I03324.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Glyma.02G225700 No alias myb domain protein 119 0.04 Orthogroups_2024-Update
Glyma.03G007500 No alias myb domain protein 117 0.03 Orthogroups_2024-Update
Glyma.05G038500 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Glyma.09G169300 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Glyma.14G086500 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Glyma.14G192600 No alias myb domain protein 64 0.04 Orthogroups_2024-Update
Glyma.16G072700 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Glyma.19G118500 No alias myb domain protein 117 0.02 Orthogroups_2024-Update
HORVU1Hr1G029540.25 No alias R1R2R3-MYB transcription factor & mobile transcription... 0.03 Orthogroups_2024-Update
HORVU4Hr1G077230.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
HORVU5Hr1G049880.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.05 Orthogroups_2024-Update
Kfl00455_0030 kfl00455_0030_v1.1 (at3g55730 : 174.0) putative transcription factor MYB109... 0.02 Orthogroups_2024-Update
LOC_Os07g14110 No alias MYB family transcription factor, putative, expressed 0.03 Orthogroups_2024-Update
LOC_Os12g07610 No alias MYB family transcription factor, putative, expressed 0.02 Orthogroups_2024-Update
MA_4704g0010 No alias (at1g26780 : 223.0) Encodes LOF1 (LATERAL ORGAN... 0.03 Orthogroups_2024-Update
MA_9684426g0010 No alias (at4g37260 : 186.0) Member of the R2R3 factor gene... 0.04 Orthogroups_2024-Update
Mp3g09350.1 No alias transcription factor (MYB) 0.03 Orthogroups_2024-Update
PSME_00004494-RA No alias (at1g22640 : 152.0) MYB-type transcription factor (MYB3)... 0.04 Orthogroups_2024-Update
PSME_00006895-RA No alias (at1g22640 : 178.0) MYB-type transcription factor (MYB3)... 0.03 Orthogroups_2024-Update
PSME_00025751-RA No alias (at3g50060 : 193.0) Encodes a member of the R2R3... 0.03 Orthogroups_2024-Update
Potri.001G300200 No alias myb domain protein 73 0.03 Orthogroups_2024-Update
Potri.001G347200 No alias myb domain protein 118 0.02 Orthogroups_2024-Update
Potri.003G123800 No alias Homeodomain-like protein 0.03 Orthogroups_2024-Update
Potri.005G186400 No alias myb domain protein 52 0.04 Orthogroups_2024-Update
Potri.007G106100 No alias myb domain protein 69 0.04 Orthogroups_2024-Update
Potri.012G039400 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.012G082000 No alias myb domain protein 98 0.03 Orthogroups_2024-Update
Potri.015G033600 No alias myb domain protein 52 0.03 Orthogroups_2024-Update
Potri.015G077700 No alias myb domain protein 98 0.04 Orthogroups_2024-Update
Potri.017G085200 No alias myb domain protein 105 0.03 Orthogroups_2024-Update
Pp1s74_264V6 No alias r2r3-myb transcription 0.01 Orthogroups_2024-Update
Seita.3G217600.1 No alias R1R2R3-MYB transcription factor 0.03 Orthogroups_2024-Update
Seita.5G382600.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.02 Orthogroups_2024-Update
Seita.9G054400.1 No alias MYB class-R2R3 transcription factor 0.08 Orthogroups_2024-Update
Sobic.005G104800.1 No alias MYB class-R2R3 subgroup-21 transcription factor 0.03 Orthogroups_2024-Update
Sobic.009G103900.1 No alias MYB class-R2R3 subgroup-22/23 transcription factor 0.03 Orthogroups_2024-Update
Solyc05g007870 No alias R2R3MYB transcription factor 117 0.03 Orthogroups_2024-Update
evm.model.contig_540.1 No alias (at2g23290 : 141.0) Member of the R2R3 factor gene... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding IEP Predicted GO
MF GO:0003674 molecular_function IEP Predicted GO
MF GO:0003824 catalytic activity IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0004332 fructose-bisphosphate aldolase activity IEP Predicted GO
MF GO:0004470 malic enzyme activity IEP Predicted GO
MF GO:0004471 malate dehydrogenase (decarboxylating) (NAD+) activity IEP Predicted GO
MF GO:0004590 orotidine-5'-phosphate decarboxylase activity IEP Predicted GO
BP GO:0006206 pyrimidine nucleobase metabolic process IEP Predicted GO
BP GO:0006207 'de novo' pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
MF GO:0008194 UDP-glycosyltransferase activity IEP Predicted GO
MF GO:0008373 sialyltransferase activity IEP Predicted GO
MF GO:0008519 ammonium transmembrane transporter activity IEP Predicted GO
BP GO:0009112 nucleobase metabolic process IEP Predicted GO
MF GO:0010333 terpene synthase activity IEP Predicted GO
BP GO:0015696 ammonium transport IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0016614 oxidoreductase activity, acting on CH-OH group of donors IEP Predicted GO
MF GO:0016615 malate dehydrogenase activity IEP Predicted GO
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016757 transferase activity, transferring glycosyl groups IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016830 carbon-carbon lyase activity IEP Predicted GO
MF GO:0016832 aldehyde-lyase activity IEP Predicted GO
MF GO:0016835 carbon-oxygen lyase activity IEP Predicted GO
MF GO:0016838 carbon-oxygen lyase activity, acting on phosphates IEP Predicted GO
BP GO:0019856 pyrimidine nucleobase biosynthetic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0046112 nucleobase biosynthetic process IEP Predicted GO
BP GO:0055086 nucleobase-containing small molecule metabolic process IEP Predicted GO
BP GO:0072488 ammonium transmembrane transport IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072528 pyrimidine-containing compound biosynthetic process IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001005 SANT/Myb 47 93
IPR001005 SANT/Myb 99 142
No external refs found!