Seita.5G051900.1

Description : ARF-GTPase *(ARF1)

Gene families : OG_42_0000220 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000220_tree

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.5G051900.1
Cluster	HCAA Clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
Brara.D02831.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
Brara.I03225.1	No alias	ARF-GTPase *(ARF1)	0.03	Orthogroups_2024-Update
GRMZM2G015361	No alias	ADP-ribosylation factor A1B	0.02	Orthogroups_2024-Update
Glyma.09G030900	No alias	ADP-ribosylation factor A1E	0.03	Orthogroups_2024-Update
LOC_Os08g15040	No alias	ADP-ribosylation factor, putative, expressed	0.02	Orthogroups_2024-Update
Potri.008G100000	No alias	ADP-ribosylation factor A1F	0.02	Orthogroups_2024-Update
Sobic.004G277800.3	No alias	Unknown function	0.04	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0001882	nucleoside binding	None	Extended
MF	GO:0001883	purine nucleoside binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0003924	GTPase activity	IEA	16Dec
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	IEA	16Dec
MF	GO:0016462	pyrophosphatase activity	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016817	hydrolase activity, acting on acid anhydrides	None	Extended
MF	GO:0016818	hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0017111	nucleoside-triphosphatase activity	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032549	ribonucleoside binding	None	Extended
MF	GO:0032550	purine ribonucleoside binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	IEP	Predicted GO
MF	GO:0004672	protein kinase activity	IEP	Predicted GO
CC	GO:0005576	extracellular region	IEP	Predicted GO
CC	GO:0005618	cell wall	IEP	Predicted GO
BP	GO:0005975	carbohydrate metabolic process	IEP	Predicted GO
BP	GO:0006468	protein phosphorylation	IEP	Predicted GO
MF	GO:0008146	sulfotransferase activity	IEP	Predicted GO
MF	GO:0016740	transferase activity	IEP	Predicted GO
MF	GO:0016762	xyloglucan:xyloglucosyl transferase activity	IEP	Predicted GO
MF	GO:0016782	transferase activity, transferring sulfur-containing groups	IEP	Predicted GO
CC	GO:0030312	external encapsulating structure	IEP	Predicted GO
BP	GO:0044238	primary metabolic process	IEP	Predicted GO
CC	GO:0048046	apoplast	IEP	Predicted GO
BP	GO:0071704	organic substance metabolic process	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR006689	Small_GTPase_ARF/SAR	5	177

External Links

No external refs found!