Seita.5G052700.1

Description : transcription factor *(DOF)

Gene families : OG_42_0000027 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000027_tree

Sequence : coding (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria italica: Seita.5G052700.1
Cluster	HCAA Clusters: Cluster_13

Target	Alias	Description	ECC score	Gene Family Method
A4A49_12086	No alias	cyclic dof factor 2	0.03	Orthogroups_2024-Update
A4A49_15151	No alias	dof zinc finger protein dof2.4	0.02	Orthogroups_2024-Update
A4A49_38012	No alias	dof zinc finger protein dof5.1	0.03	Orthogroups_2024-Update
At1g26790	No alias	Dof-type zinc finger DNA-binding family protein...	0.02	Orthogroups_2024-Update
At1g51700	No alias	Dof zinc finger protein DOF1.7...	0.03	Orthogroups_2024-Update
At1g64620	No alias	Dof zinc finger protein DOF1.8...	0.04	Orthogroups_2024-Update
At1g69570	No alias	Cyclic dof factor 5 [Source:UniProtKB/Swiss-Prot;Acc:Q9SEZ3]	0.04	Orthogroups_2024-Update
At3g47500	No alias	Cyclic dof factor 3 [Source:UniProtKB/Swiss-Prot;Acc:Q8LFV3]	0.03	Orthogroups_2024-Update
At3g50410	No alias	OBP1 [Source:UniProtKB/TrEMBL;Acc:A0A178VFT5]	0.03	Orthogroups_2024-Update
At5g39660	No alias	Cyclic dof factor 2 [Source:UniProtKB/Swiss-Prot;Acc:Q93ZL5]	0.02	Orthogroups_2024-Update
At5g62430	No alias	Cyclic dof factor 1 [Source:UniProtKB/Swiss-Prot;Acc:Q8W1E3]	0.05	Orthogroups_2024-Update
Bradi1g17410	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
Bradi2g09720	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Bradi3g51510	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Brara.B03736.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.C00072.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.C04204.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.D00980.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.F01753.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.F02115.1	No alias	transcription factor *(DOF)	0.04	Orthogroups_2024-Update
Brara.G01458.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.H02152.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Brara.I00088.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Brara.I00633.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
GRMZM2G089949	No alias	cycling DOF factor 2	0.04	Orthogroups_2024-Update
Glyma.05G025900	No alias	cycling DOF factor 3	0.04	Orthogroups_2024-Update
Glyma.07G193900	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.08G195300	No alias	DOF zinc finger protein 1	0.04	Orthogroups_2024-Update
Glyma.10G173700	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Glyma.15G039300	No alias	OBF-binding protein 3	0.03	Orthogroups_2024-Update
Glyma.19G118000	No alias	cycling DOF factor 3	0.03	Orthogroups_2024-Update
HORVU1Hr1G005390.2	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU4Hr1G013890.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
HORVU4Hr1G074990.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
HORVU6Hr1G065250.4	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
LOC_Os01g15900	No alias	expressed protein	0.04	Orthogroups_2024-Update
LOC_Os02g45200	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g47810	No alias	dof zinc finger domain containing protein, putative, expressed	0.02	Orthogroups_2024-Update
LOC_Os07g48570	No alias	expressed protein	0.03	Orthogroups_2024-Update
LOC_Os08g38220	No alias	dof zinc finger domain containing protein, putative, expressed	0.04	Orthogroups_2024-Update
PSME_00028077-RA	No alias	(at5g39660 : 211.0) Dof-type zinc finger...	0.05	Orthogroups_2024-Update
PSME_00041316-RA	No alias	(at5g39660 : 139.0) Dof-type zinc finger...	0.04	Orthogroups_2024-Update
Potri.004G046600	No alias	Dof-type zinc finger DNA-binding family protein	0.03	Orthogroups_2024-Update
Potri.004G056900	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Potri.008G087800	No alias	cycling DOF factor 2	0.05	Orthogroups_2024-Update
Potri.011G055600	No alias	Dof-type zinc finger DNA-binding family protein	0.02	Orthogroups_2024-Update
Pp1s124_139V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s351_46V6	No alias	zinc finger	0.02	Orthogroups_2024-Update
Pp1s37_7V6	No alias	zinc finger	0.03	Orthogroups_2024-Update
Sobic.001G034300.3	No alias	transcription factor *(DOF)	0.01	Orthogroups_2024-Update
Sobic.001G252800.1	No alias	transcription factor *(DOF)	0.02	Orthogroups_2024-Update
Sobic.002G421900.1	No alias	transcription factor *(DOF)	0.03	Orthogroups_2024-Update
Sobic.003G121400.1	No alias	transcription factor *(DOF)	0.08	Orthogroups_2024-Update
Sobic.009G014400.1	No alias	transcription factor *(DOF)	0.06	Orthogroups_2024-Update
Solyc02g067230	No alias	Dof zinc finger protein3	0.03	Orthogroups_2024-Update
Solyc02g077950	No alias	Dof zinc finger protein5	0.03	Orthogroups_2024-Update
Solyc02g078620	No alias	Dof zinc finger protein (AHRD V3.3 *** W9RD26_9ROSA)	0.02	Orthogroups_2024-Update
Solyc02g088070	No alias	Dof zinc finger protein (AHRD V3.3 *** W9QEV1_9ROSA)	0.03	Orthogroups_2024-Update
Solyc05g007880	No alias	Dof zinc finger protein (AHRD V3.3 *** W9S8B0_9ROSA)	0.04	Orthogroups_2024-Update
Sopen02g015430	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen02g016410	No alias	Dof domain, zinc finger	0.04	Orthogroups_2024-Update
Sopen02g032780	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update
Sopen05g003730	No alias	Dof domain, zinc finger	0.02	Orthogroups_2024-Update
Sopen06g027050	No alias	Dof domain, zinc finger	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	IEA	16Dec
MF	GO:0005488	binding	None	Extended
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	16Dec
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

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Type	GO Term	Name	Evidence	Source
MF	GO:0003873	6-phosphofructo-2-kinase activity	IEP	Predicted GO
MF	GO:0003905	alkylbase DNA N-glycosylase activity	IEP	Predicted GO
MF	GO:0004066	asparagine synthase (glutamine-hydrolyzing) activity	IEP	Predicted GO
MF	GO:0004089	carbonate dehydratase activity	IEP	Predicted GO
MF	GO:0004779	sulfate adenylyltransferase activity	IEP	Predicted GO
MF	GO:0004781	sulfate adenylyltransferase (ATP) activity	IEP	Predicted GO
MF	GO:0004814	arginine-tRNA ligase activity	IEP	Predicted GO
BP	GO:0006000	fructose metabolic process	IEP	Predicted GO
BP	GO:0006420	arginyl-tRNA aminoacylation	IEP	Predicted GO
BP	GO:0006528	asparagine metabolic process	IEP	Predicted GO
BP	GO:0006529	asparagine biosynthetic process	IEP	Predicted GO
MF	GO:0008725	DNA-3-methyladenine glycosylase activity	IEP	Predicted GO
BP	GO:0009066	aspartate family amino acid metabolic process	IEP	Predicted GO
BP	GO:0009067	aspartate family amino acid biosynthetic process	IEP	Predicted GO
MF	GO:0015075	ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015095	magnesium ion transmembrane transporter activity	IEP	Predicted GO
MF	GO:0015318	inorganic molecular entity transmembrane transporter activity	IEP	Predicted GO
BP	GO:0015693	magnesium ion transport	IEP	Predicted GO
MF	GO:0016757	transferase activity, transferring glycosyl groups	IEP	Predicted GO
MF	GO:0016874	ligase activity	IEP	Predicted GO
MF	GO:0016884	carbon-nitrogen ligase activity, with glutamine as amido-N-donor	IEP	Predicted GO
MF	GO:0019104	DNA N-glycosylase activity	IEP	Predicted GO
BP	GO:0030001	metal ion transport	IEP	Predicted GO
MF	GO:0030151	molybdenum ion binding	IEP	Predicted GO
MF	GO:0043565	sequence-specific DNA binding	IEP	Predicted GO
MF	GO:0043733	DNA-3-methylbase glycosylase activity	IEP	Predicted GO
MF	GO:0046873	metal ion transmembrane transporter activity	IEP	Predicted GO
BP	GO:0055085	transmembrane transport	IEP	Predicted GO
MF	GO:0070566	adenylyltransferase activity	IEP	Predicted GO
BP	GO:0070838	divalent metal ion transport	IEP	Predicted GO
BP	GO:0072511	divalent inorganic cation transport	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR003851	Znf_Dof	207	264

External Links

No external refs found!

Seita.5G052700.1

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation