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  5. Seita.5G058500.1

Seita.5G058500.1


Description : auxin signalling transcriptional co-repressor *(TPL/TPR) & transcriptional co-repressor *(TPL/TPR)


Gene families : OG_42_0000373 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000373_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G058500.1
Cluster HCAA Clusters: Cluster_2

Target Alias Description ECC score Gene Family Method Actions
A4A49_31958 No alias topless-related protein 4 0.02 Orthogroups_2024-Update
Brara.C03589.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.03 Orthogroups_2024-Update
Brara.E02482.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.02 Orthogroups_2024-Update
Brara.G02036.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.04 Orthogroups_2024-Update
GRMZM2G042992 No alias Transducin family protein / WD-40 repeat family protein 0.03 Orthogroups_2024-Update
Glyma.06G066200 No alias TOPLESS-related 1 0.02 Orthogroups_2024-Update
MA_118509g0010 No alias (at1g15750 : 406.0) Encodes a protein with several WD40... 0.03 Orthogroups_2024-Update
PSME_00023926-RA No alias (at1g80490 : 545.0) TOPLESS-related 1 (TPR1); INVOLVED... 0.02 Orthogroups_2024-Update
Sobic.003G115900.1 No alias auxin signalling transcriptional co-repressor *(TPL/TPR)... 0.04 Orthogroups_2024-Update
Solyc03g117360 No alias TOPLESS1 0.02 Orthogroups_2024-Update
Sopen03g035660 No alias WD domain, G-beta repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003924 GTPase activity IEP Predicted GO
MF GO:0004126 cytidine deaminase activity IEP Predicted GO
BP GO:0006213 pyrimidine nucleoside metabolic process IEP Predicted GO
BP GO:0006216 cytidine catabolic process IEP Predicted GO
BP GO:0009116 nucleoside metabolic process IEP Predicted GO
BP GO:0009119 ribonucleoside metabolic process IEP Predicted GO
BP GO:0009164 nucleoside catabolic process IEP Predicted GO
BP GO:0009972 cytidine deamination IEP Predicted GO
MF GO:0016787 hydrolase activity IEP Predicted GO
MF GO:0016790 thiolester hydrolase activity IEP Predicted GO
MF GO:0016810 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds IEP Predicted GO
MF GO:0016814 hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in cyclic amidines IEP Predicted GO
MF GO:0019239 deaminase activity IEP Predicted GO
BP GO:0034656 nucleobase-containing small molecule catabolic process IEP Predicted GO
BP GO:0042454 ribonucleoside catabolic process IEP Predicted GO
BP GO:0044282 small molecule catabolic process IEP Predicted GO
BP GO:0046087 cytidine metabolic process IEP Predicted GO
BP GO:0046131 pyrimidine ribonucleoside metabolic process IEP Predicted GO
BP GO:0046133 pyrimidine ribonucleoside catabolic process IEP Predicted GO
BP GO:0046135 pyrimidine nucleoside catabolic process IEP Predicted GO
BP GO:0072527 pyrimidine-containing compound metabolic process IEP Predicted GO
BP GO:0072529 pyrimidine-containing compound catabolic process IEP Predicted GO
BP GO:1901657 glycosyl compound metabolic process IEP Predicted GO
BP GO:1901658 glycosyl compound catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR001680 WD40_repeat 478 517
IPR001680 WD40_repeat 439 475
IPR001680 WD40_repeat 911 943
No external refs found!