1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G066100.1

Seita.5G066100.1


Description : EC_3.2 glycosylase


Gene families : OG_42_0000439 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000439_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G066100.1
Cluster HCAA Clusters: Cluster_275

Target Alias Description ECC score Gene Family Method Actions
At5g20940 No alias Beta-glucosidase-like protein... 0.03 Orthogroups_2024-Update
PSME_00026900-RA No alias (at5g20950 : 759.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
PSME_00032881-RA No alias (at5g20950 : 846.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
PSME_00032893-RA No alias (at5g20950 : 756.0) Glycosyl hydrolase family protein;... 0.02 Orthogroups_2024-Update
Pp1s309_65V6 No alias glycosyl hydrolase family 3 n terminal domain containing... 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds IEA 16Dec
BP GO:0005975 carbohydrate metabolic process IEA 16Dec
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006694 steroid biosynthetic process IEP Predicted GO
BP GO:0008202 steroid metabolic process IEP Predicted GO
MF GO:0016229 steroid dehydrogenase activity IEP Predicted GO
BP GO:0017004 cytochrome complex assembly IEP Predicted GO
BP GO:0019321 pentose metabolic process IEP Predicted GO
BP GO:0019566 arabinose metabolic process IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0033764 steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEP Predicted GO
BP GO:0046373 L-arabinose metabolic process IEP Predicted GO
MF GO:0046556 alpha-L-arabinofuranosidase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR001764 Glyco_hydro_3_N 75 404
IPR002772 Glyco_hydro_3_C 441 654
No external refs found!