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  5. Seita.5G075100.1

Seita.5G075100.1


Description : bHLH-type transcription factor


Gene families : OG_42_0000539 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000539_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G075100.1
Cluster HCAA Clusters: Cluster_171

Target Alias Description ECC score Gene Family Method Actions
At1g27740 No alias Transcription factor bHLH54... 0.05 Orthogroups_2024-Update
Bradi1g42440 No alias ROOT HAIR DEFECTIVE6 0.02 Orthogroups_2024-Update
Glyma.10G257500 No alias ROOT HAIR DEFECTIVE 6-LIKE 2 0.02 Orthogroups_2024-Update
Glyma.14G069700 No alias RHD SIX-LIKE 1 0.03 Orthogroups_2024-Update
Glyma.20G133700 No alias basic helix-loop-helix (bHLH) DNA-binding superfamily protein 0.02 Orthogroups_2024-Update
LOC_Os06g30090 No alias helix-loop-helix DNA-binding domain containing protein, expressed 0.02 Orthogroups_2024-Update
Pp1s60_187V6 No alias No description available 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0046983 protein dimerization activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0005516 calmodulin binding IEP Predicted GO
InterPro domains Description Start Stop
IPR011598 bHLH_dom 216 256
No external refs found!