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  5. Seita.5G075900.1

Seita.5G075900.1


Description : Unknown function


Gene families : OG_42_0007299 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007299_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G075900.1
Cluster HCAA Clusters: Cluster_45

Target Alias Description ECC score Gene Family Method Actions
At1g18850 No alias F6A14.6 protein [Source:UniProtKB/TrEMBL;Acc:Q9M9V4] 0.13 Orthogroups_2024-Update
Brara.F01312.1 No alias Unknown function 0.11 Orthogroups_2024-Update
Cre03.g163700 No alias Function unknown 0.05 Orthogroups_2024-Update
GRMZM2G076104 No alias Function unknown 0.07 Orthogroups_2024-Update
HORVU3Hr1G001360.1 No alias Unknown function 0.07 Orthogroups_2024-Update
Kfl00249_0050 kfl00249_0050_v1.1 no hits & (original description: no original description) 0.05 Orthogroups_2024-Update
LOC_Os01g02170 No alias expressed protein 0.05 Orthogroups_2024-Update
Mp2g01310.1 No alias no hits & (original description: none) 0.03 Orthogroups_2024-Update
Potri.015G064300 No alias Function unknown 0.06 Orthogroups_2024-Update
Sobic.003G098200.1 No alias Unknown function 0.18 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001522 pseudouridine synthesis IEP Predicted GO
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003755 peptidyl-prolyl cis-trans isomerase activity IEP Predicted GO
MF GO:0004645 phosphorylase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
CC GO:0005730 nucleolus IEP Predicted GO
CC GO:0005732 small nucleolar ribonucleoprotein complex IEP Predicted GO
CC GO:0005741 mitochondrial outer membrane IEP Predicted GO
BP GO:0006139 nucleobase-containing compound metabolic process IEP Predicted GO
BP GO:0006364 rRNA processing IEP Predicted GO
BP GO:0006396 RNA processing IEP Predicted GO
BP GO:0006725 cellular aromatic compound metabolic process IEP Predicted GO
MF GO:0008134 transcription factor binding IEP Predicted GO
MF GO:0008184 glycogen phosphorylase activity IEP Predicted GO
BP GO:0009451 RNA modification IEP Predicted GO
BP GO:0016070 RNA metabolic process IEP Predicted GO
BP GO:0016072 rRNA metabolic process IEP Predicted GO
MF GO:0016859 cis-trans isomerase activity IEP Predicted GO
MF GO:0019843 rRNA binding IEP Predicted GO
BP GO:0022613 ribonucleoprotein complex biogenesis IEP Predicted GO
CC GO:0030684 preribosome IEP Predicted GO
CC GO:0031968 organelle outer membrane IEP Predicted GO
CC GO:0032040 small-subunit processome IEP Predicted GO
CC GO:0034457 Mpp10 complex IEP Predicted GO
BP GO:0034470 ncRNA processing IEP Predicted GO
BP GO:0034641 cellular nitrogen compound metabolic process IEP Predicted GO
BP GO:0034660 ncRNA metabolic process IEP Predicted GO
BP GO:0042254 ribosome biogenesis IEP Predicted GO
BP GO:0044085 cellular component biogenesis IEP Predicted GO
CC GO:0044422 organelle part IEP Predicted GO
CC GO:0044428 nuclear part IEP Predicted GO
CC GO:0044446 intracellular organelle part IEP Predicted GO
CC GO:0044452 nucleolar part IEP Predicted GO
BP GO:0046483 heterocycle metabolic process IEP Predicted GO
BP GO:0090304 nucleic acid metabolic process IEP Predicted GO
MF GO:0097159 organic cyclic compound binding IEP Predicted GO
CC GO:0098805 whole membrane IEP Predicted GO
BP GO:1901360 organic cyclic compound metabolic process IEP Predicted GO
MF GO:1901363 heterocyclic compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!