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  5. Seita.5G080600.1

Seita.5G080600.1


Description : pectin acetylesterase *(PAE)


Gene families : OG_42_0000252 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000252_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G080600.1
Cluster HCAA Clusters: Cluster_142

Target Alias Description ECC score Gene Family Method Actions
A4A49_12025 No alias pectin acetylesterase 8 0.03 Orthogroups_2024-Update
A4A49_22076 No alias pectin acetylesterase 8 0.04 Orthogroups_2024-Update
At1g57590 No alias Pectin acetylesterase 2 [Source:UniProtKB/Swiss-Prot;Acc:F4I839] 0.03 Orthogroups_2024-Update
Brara.H01014.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Brara.I01620.1 No alias pectin acetylesterase *(PAE) 0.02 Orthogroups_2024-Update
Glyma.16G107600 No alias Pectinacetylesterase family protein 0.02 Orthogroups_2024-Update
Glyma.20G090500 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
LOC_Os01g74330 No alias pectinacetylesterase domain containing protein, expressed 0.03 Orthogroups_2024-Update
LOC_Os04g51340 No alias pectinacetylesterase domain containing protein, expressed 0.05 Orthogroups_2024-Update
MA_10436630g0010 No alias (at3g05910 : 355.0) Pectinacetylesterase family protein;... 0.04 Orthogroups_2024-Update
MA_3303g0010 No alias (at5g23870 : 345.0) Pectinacetylesterase family protein;... 0.03 Orthogroups_2024-Update
MA_52077g0010 No alias (at4g19420 : 502.0) Pectinacetylesterase family protein;... 0.05 Orthogroups_2024-Update
PSME_00015532-RA No alias (at4g19420 : 230.0) Pectinacetylesterase family protein;... 0.02 Orthogroups_2024-Update
Potri.013G000900 No alias Pectinacetylesterase family protein 0.03 Orthogroups_2024-Update
Seita.7G225900.1 No alias pectin acetylesterase *(PAE) 0.03 Orthogroups_2024-Update
Solyc10g086480 No alias Pectinacetylesterase family protein (AHRD V3.3 *** AT3G09410.1) 0.02 Orthogroups_2024-Update
Sopen08g001800 No alias Pectinacetylesterase 0.03 Orthogroups_2024-Update
Sopen10g035860 No alias Pectinacetylesterase 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0016787 hydrolase activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0030246 carbohydrate binding IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
InterPro domains Description Start Stop
IPR004963 PAE/NOTUM 71 420
No external refs found!