1. Home
  2. Species
  3. Setaria italica
  4. Sequence
  5. Seita.5G092700.1

Seita.5G092700.1


Description : class-C-I small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G092700.1
Cluster HCAA Clusters: Cluster_229

Target Alias Description ECC score Gene Family Method Actions
A4A49_23634 No alias 18.1 kda class i heat shock protein 0.03 Orthogroups_2024-Update
Brara.B00440.1 No alias Unknown function 0.03 Orthogroups_2024-Update
Brara.D01770.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Brara.E01351.1 No alias class-C-I small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G043600 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Glyma.07G200700 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.17G224900 No alias 17.6 kDa class II heat shock protein 0.03 Orthogroups_2024-Update
Glyma.20G078400 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
HORVU3Hr1G007500.4 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
PSME_00008030-RA No alias (at5g12030 : 128.0) Encodes a cytosolic small heat shock... 0.04 Orthogroups_2024-Update
Potri.003G071100 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Potri.010G175200 No alias HSP20-like chaperones superfamily protein 0.04 Orthogroups_2024-Update
Potri.017G130700 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Pp1s129_85V6 No alias 18.1 kDa class I heat shock protein (HSP 18.1) [Pisum sativum] 0.03 Orthogroups_2024-Update
Pp1s18_56V6 No alias No description available 0.03 Orthogroups_2024-Update
Pp1s77_290V6 No alias No description available 0.02 Orthogroups_2024-Update
Sobic.003G039400.1 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G082200.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sopen01g045370 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
Toggle parental
Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004650 polygalacturonase activity IEP Predicted GO
BP GO:0006820 anion transport IEP Predicted GO
BP GO:0006835 dicarboxylic acid transport IEP Predicted GO
BP GO:0015711 organic anion transport IEP Predicted GO
BP GO:0015740 C4-dicarboxylate transport IEP Predicted GO
BP GO:0015743 malate transport IEP Predicted GO
BP GO:0015849 organic acid transport IEP Predicted GO
MF GO:0016829 lyase activity IEP Predicted GO
MF GO:0016840 carbon-nitrogen lyase activity IEP Predicted GO
MF GO:0016843 amine-lyase activity IEP Predicted GO
MF GO:0016844 strictosidine synthase activity IEP Predicted GO
MF GO:0030599 pectinesterase activity IEP Predicted GO
BP GO:0040008 regulation of growth IEP Predicted GO
BP GO:0042545 cell wall modification IEP Predicted GO
BP GO:0045229 external encapsulating structure organization IEP Predicted GO
BP GO:0045927 positive regulation of growth IEP Predicted GO
BP GO:0046942 carboxylic acid transport IEP Predicted GO
BP GO:0048518 positive regulation of biological process IEP Predicted GO
BP GO:0050789 regulation of biological process IEP Predicted GO
BP GO:0065007 biological regulation IEP Predicted GO
BP GO:0071555 cell wall organization IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 45 148
No external refs found!