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  5. Seita.5G092900.1

Seita.5G092900.1


Description : class-C-I small heat-shock-responsive protein


Gene families : OG_42_0000044 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000044_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G092900.1
Cluster HCAA Clusters: Cluster_62

Target Alias Description ECC score Gene Family Method Actions
At1g54050 No alias 17.4 kDa class III heat shock protein... 0.02 Orthogroups_2024-Update
GRMZM2G046382 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G481605 No alias HSP20-like chaperones superfamily protein 0.02 Orthogroups_2024-Update
Glyma.01G106800 No alias HSP20-like chaperones superfamily protein 0.03 Orthogroups_2024-Update
Glyma.14G100000 No alias 17.6 kDa class II heat shock protein 0.02 Orthogroups_2024-Update
MA_52700g0010 No alias (p31673|hsp21_orysa : 159.0) 17.4 kDa class I heat shock... 0.03 Orthogroups_2024-Update
PSME_00016774-RA No alias (at4g10250 : 126.0) Columbia endomembrane-localized... 0.02 Orthogroups_2024-Update
Seita.5G092400.1 No alias Unknown function 0.02 Orthogroups_2024-Update
Sobic.003G039400.1 No alias class-C-II small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.003G082100.1 No alias class-C-I small heat-shock-responsive protein 0.03 Orthogroups_2024-Update
Sobic.005G086400.1 No alias class-ER small heat-shock-responsive protein 0.04 Orthogroups_2024-Update
Solyc08g062450 No alias Heat-shock protein, putative (AHRD V3.3 *** B9RQT7_RICCO) 0.02 Orthogroups_2024-Update
Sopen09g007990 No alias Hsp20/alpha crystallin family 0.02 Orthogroups_2024-Update
evm.model.contig_3487.1 No alias no hits & (original description: no original description) 0.01 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0001101 response to acid chemical IEP Predicted GO
MF GO:0003968 RNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0005544 calcium-dependent phospholipid binding IEP Predicted GO
BP GO:0009415 response to water IEP Predicted GO
BP GO:0009628 response to abiotic stimulus IEP Predicted GO
BP GO:0010035 response to inorganic substance IEP Predicted GO
BP GO:0010215 cellulose microfibril organization IEP Predicted GO
MF GO:0016209 antioxidant activity IEP Predicted GO
MF GO:0016684 oxidoreductase activity, acting on peroxide as acceptor IEP Predicted GO
BP GO:0030198 extracellular matrix organization IEP Predicted GO
BP GO:0043062 extracellular structure organization IEP Predicted GO
MF GO:0046983 protein dimerization activity IEP Predicted GO
MF GO:0051920 peroxiredoxin activity IEP Predicted GO
BP GO:1901700 response to oxygen-containing compound IEP Predicted GO
InterPro domains Description Start Stop
IPR002068 A-crystallin/Hsp20_dom 47 150
No external refs found!