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  5. Seita.5G103600.1

Seita.5G103600.1


Description : subunit beta of type-I protein prenyltransferase complex


Gene families : OG_42_0007623 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0007623_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G103600.1
Cluster HCAA Clusters: Cluster_100

Target Alias Description ECC score Gene Family Method Actions
Sopen05g033000 No alias Prenyltransferase and squalene oxidase repeat 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003887 DNA-directed DNA polymerase activity IEP Predicted GO
MF GO:0004842 ubiquitin-protein transferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005507 copper ion binding IEP Predicted GO
BP GO:0006260 DNA replication IEP Predicted GO
BP GO:0006457 protein folding IEP Predicted GO
MF GO:0008131 primary amine oxidase activity IEP Predicted GO
MF GO:0008270 zinc ion binding IEP Predicted GO
BP GO:0009308 amine metabolic process IEP Predicted GO
CC GO:0016272 prefoldin complex IEP Predicted GO
BP GO:0016567 protein ubiquitination IEP Predicted GO
MF GO:0016638 oxidoreductase activity, acting on the CH-NH2 group of donors IEP Predicted GO
MF GO:0016641 oxidoreductase activity, acting on the CH-NH2 group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016779 nucleotidyltransferase activity IEP Predicted GO
MF GO:0019787 ubiquitin-like protein transferase activity IEP Predicted GO
BP GO:0032446 protein modification by small protein conjugation IEP Predicted GO
MF GO:0034061 DNA polymerase activity IEP Predicted GO
MF GO:0043169 cation binding IEP Predicted GO
MF GO:0046872 metal ion binding IEP Predicted GO
MF GO:0046914 transition metal ion binding IEP Predicted GO
MF GO:0048038 quinone binding IEP Predicted GO
MF GO:0051082 unfolded protein binding IEP Predicted GO
BP GO:0070647 protein modification by small protein conjugation or removal IEP Predicted GO
MF GO:0140097 catalytic activity, acting on DNA IEP Predicted GO
InterPro domains Description Start Stop
IPR001330 PFTB_repeat 137 170
IPR001330 PFTB_repeat 286 325
IPR001330 PFTB_repeat 103 120
IPR001330 PFTB_repeat 175 218
IPR001330 PFTB_repeat 235 277
No external refs found!