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  5. Seita.5G107600.1

Seita.5G107600.1


Description : histone *(H2B)


Gene families : OG_42_0000153 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000153_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G107600.1
Cluster HCAA Clusters: Cluster_226

Target Alias Description ECC score Gene Family Method Actions
A4A49_56759 No alias putative histone h2b.1 0.04 Orthogroups_2024-Update
Bradi2g23230 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
Bradi3g54520 No alias Histone superfamily protein 0.03 Orthogroups_2024-Update
GRMZM2G046841 No alias Histone superfamily protein 0.06 Orthogroups_2024-Update
GRMZM2G401147 No alias Histone superfamily protein 0.04 Orthogroups_2024-Update
HORVU1Hr1G058440.4 No alias histone *(H2B) 0.04 Orthogroups_2024-Update
HORVU3Hr1G013680.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU3Hr1G086610.4 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU7Hr1G110090.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
HORVU7Hr1G110310.1 No alias histone *(H2B) 0.02 Orthogroups_2024-Update
LOC_Os01g05630 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
LOC_Os01g05900 No alias Core histone H2A/H2B/H3/H4 domain containing protein,... 0.03 Orthogroups_2024-Update
MA_1040421g0010 No alias (at3g45980 : 114.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
MA_10428006g0010 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.05 Orthogroups_2024-Update
MA_10435143g0020 No alias (at3g45980 : 145.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
MA_10436516g0020 No alias (at3g45980 : 175.0) Encodes a histone 2B (H2B) protein.... 0.04 Orthogroups_2024-Update
MA_10436516g0030 No alias (at3g45980 : 106.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
PSME_00037687-RA No alias (at3g45980 : 174.0) Encodes a histone 2B (H2B) protein.... 0.03 Orthogroups_2024-Update
Potri.009G028001 No alias Histone superfamily protein 0.02 Orthogroups_2024-Update
Pp1s256_64V6 No alias histone 0.02 Orthogroups_2024-Update
Seita.1G291600.1 No alias histone *(H2B) 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003677 DNA binding IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0003700 DNA-binding transcription factor activity IEP Predicted GO
MF GO:0004519 endonuclease activity IEP Predicted GO
MF GO:0004521 endoribonuclease activity IEP Predicted GO
MF GO:0004523 RNA-DNA hybrid ribonuclease activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0004672 protein kinase activity IEP Predicted GO
MF GO:0005524 ATP binding IEP Predicted GO
BP GO:0006464 cellular protein modification process IEP Predicted GO
BP GO:0006468 protein phosphorylation IEP Predicted GO
BP GO:0006793 phosphorus metabolic process IEP Predicted GO
BP GO:0006796 phosphate-containing compound metabolic process IEP Predicted GO
BP GO:0006807 nitrogen compound metabolic process IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
MF GO:0016301 kinase activity IEP Predicted GO
BP GO:0016310 phosphorylation IEP Predicted GO
MF GO:0016740 transferase activity IEP Predicted GO
MF GO:0016772 transferase activity, transferring phosphorus-containing groups IEP Predicted GO
MF GO:0016773 phosphotransferase activity, alcohol group as acceptor IEP Predicted GO
MF GO:0016891 endoribonuclease activity, producing 5'-phosphomonoesters IEP Predicted GO
MF GO:0016893 endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 5'-phosphomonoesters IEP Predicted GO
BP GO:0019538 protein metabolic process IEP Predicted GO
BP GO:0036211 protein modification process IEP Predicted GO
BP GO:0043170 macromolecule metabolic process IEP Predicted GO
BP GO:0043412 macromolecule modification IEP Predicted GO
BP GO:0044237 cellular metabolic process IEP Predicted GO
BP GO:0044238 primary metabolic process IEP Predicted GO
BP GO:0044260 cellular macromolecule metabolic process IEP Predicted GO
BP GO:0044267 cellular protein metabolic process IEP Predicted GO
BP GO:0071704 organic substance metabolic process IEP Predicted GO
MF GO:0140096 catalytic activity, acting on a protein IEP Predicted GO
BP GO:1901564 organonitrogen compound metabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR007125 Histone_H2A/H2B/H3 6 129
No external refs found!