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  5. Seita.5G121700.1

Seita.5G121700.1


Description : Unknown function


Gene families : OG_42_0000814 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000814_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G121700.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
A4A49_32643 No alias dead-box atp-dependent rna helicase 20 0.03 Orthogroups_2024-Update
Bradi2g05990 No alias DEA(D/H)-box RNA helicase family protein 0.04 Orthogroups_2024-Update
Glyma.08G193700 No alias DEA(D/H)-box RNA helicase family protein 0.03 Orthogroups_2024-Update
LOC_Os01g36860 No alias DEAD-box ATP-dependent RNA helicase 40, putative, expressed 0.02 Orthogroups_2024-Update
LOC_Os01g68320 No alias DEAD-box ATP-dependent RNA helicase 30, putative, expressed 0.05 Orthogroups_2024-Update
Potri.003G038300 No alias DEA(D/H)-box RNA helicase family protein 0.04 Orthogroups_2024-Update
Potri.010G152400 No alias DEAD box RNA helicase family protein 0.03 Orthogroups_2024-Update
Potri.015G083000 No alias P-loop containing nucleoside triphosphate hydrolases... 0.03 Orthogroups_2024-Update
Sobic.003G187400.1 No alias Unknown function 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEA 16Dec
MF GO:0005515 protein binding IEA 16Dec
MF GO:0005524 ATP binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006508 proteolysis IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0007275 multicellular organism development IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0009056 catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0031625 ubiquitin protein ligase binding IEP Predicted GO
BP GO:0032501 multicellular organismal process IEP Predicted GO
MF GO:0042393 histone binding IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044248 cellular catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
MF GO:0044389 ubiquitin-like protein ligase binding IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
BP GO:1901575 organic substance catabolic process IEP Predicted GO
InterPro domains Description Start Stop
IPR011545 DEAD/DEAH_box_helicase_dom 181 351
IPR001650 Helicase_C 388 496
IPR001202 WW_dom 22 52
No external refs found!