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  5. Seita.5G125300.1

Seita.5G125300.1


Description : component *(LUG/LUH) of transcriptional co-repressor complex


Gene families : OG_42_0000674 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000674_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G125300.1
Cluster HCAA Clusters: Cluster_14

Target Alias Description ECC score Gene Family Method Actions
Glyma.17G120000 No alias LisH dimerisation motif;WD40/YVTN repeat-like-containing domain 0.03 Orthogroups_2024-Update
Sobic.003G046400.5 No alias component *(LUG/LUH) of transcriptional co-repressor complex 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
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Type GO Term Name Evidence Source
BP GO:0006950 response to stress IEP Predicted GO
BP GO:0006952 defense response IEP Predicted GO
MF GO:0016651 oxidoreductase activity, acting on NAD(P)H IEP Predicted GO
CC GO:0042765 GPI-anchor transamidase complex IEP Predicted GO
CC GO:0044432 endoplasmic reticulum part IEP Predicted GO
MF GO:0050664 oxidoreductase activity, acting on NAD(P)H, oxygen as acceptor IEP Predicted GO
BP GO:0050896 response to stimulus IEP Predicted GO
InterPro domains Description Start Stop
IPR006594 LisH 10 36
IPR001680 WD40_repeat 619 653
IPR001680 WD40_repeat 584 611
IPR001680 WD40_repeat 661 697
IPR001680 WD40_repeat 827 858
IPR001680 WD40_repeat 741 777
No external refs found!