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  5. Seita.5G137700.1

Seita.5G137700.1


Description : C2H2 subclass IDD transcription factor


Gene families : OG_42_0000119 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000119_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G137700.1
Cluster HCAA Clusters: Cluster_132

Target Alias Description ECC score Gene Family Method Actions
At1g03840 No alias Uncharacterized protein At1g03840 (Fragment)... 0.03 Orthogroups_2024-Update
Bradi1g18370 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
GRMZM5G828179 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.04G033300 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.05G248300 No alias C2H2-like zinc finger protein 0.02 Orthogroups_2024-Update
Glyma.07G009100 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.08G056800 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.13G139000 No alias C2H2-like zinc finger protein 0.03 Orthogroups_2024-Update
Glyma.13G349500 No alias indeterminate(ID)-domain 7 0.03 Orthogroups_2024-Update
Glyma.15G024500 No alias indeterminate(ID)-domain 11 0.04 Orthogroups_2024-Update
Glyma.19G159600 No alias indeterminate(ID)-domain 12 0.04 Orthogroups_2024-Update
Potri.003G040100 No alias indeterminate(ID)-domain 11 0.03 Orthogroups_2024-Update
Potri.017G017100 No alias C2H2 and C2HC zinc fingers superfamily protein 0.02 Orthogroups_2024-Update
Seita.9G504400.1 No alias C2H2 subclass IDD transcription factor & elicitor... 0.03 Orthogroups_2024-Update
Solyc09g074780 No alias Zinc finger protein (AHRD V3.3 *** E9NZV2_PHAVU) 0.03 Orthogroups_2024-Update
Sopen08g018610 No alias hypothetical protein 0.03 Orthogroups_2024-Update
Sopen11g027970 No alias Zinc finger, C2H2 type 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
BP GO:0000375 RNA splicing, via transesterification reactions IEP Predicted GO
BP GO:0000377 RNA splicing, via transesterification reactions with bulged adenosine as nucleophile IEP Predicted GO
BP GO:0000398 mRNA splicing, via spliceosome IEP Predicted GO
MF GO:0004144 diacylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
CC GO:0005681 spliceosomal complex IEP Predicted GO
MF GO:0008374 O-acyltransferase activity IEP Predicted GO
BP GO:0008380 RNA splicing IEP Predicted GO
MF GO:0016411 acylglycerol O-acyltransferase activity IEP Predicted GO
MF GO:0019842 vitamin binding IEP Predicted GO
MF GO:0030170 pyridoxal phosphate binding IEP Predicted GO
MF GO:0030976 thiamine pyrophosphate binding IEP Predicted GO
BP GO:0045017 glycerolipid biosynthetic process IEP Predicted GO
MF GO:0048037 cofactor binding IEP Predicted GO
MF GO:0050662 coenzyme binding IEP Predicted GO
MF GO:0070279 vitamin B6 binding IEP Predicted GO
MF GO:1901681 sulfur compound binding IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!