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  5. Seita.5G138600.1

Seita.5G138600.1


Description : Unknown function


Gene families : OG_42_0009808 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0009808_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G138600.1
Cluster HCAA Clusters: Cluster_201


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding IEP Predicted GO
MF GO:0003723 RNA binding IEP Predicted GO
MF GO:0003899 DNA-directed 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0016597 amino acid binding IEP Predicted GO
MF GO:0016743 carboxyl- or carbamoyltransferase activity IEP Predicted GO
MF GO:0031406 carboxylic acid binding IEP Predicted GO
MF GO:0034062 5'-3' RNA polymerase activity IEP Predicted GO
MF GO:0043177 organic acid binding IEP Predicted GO
MF GO:0097747 RNA polymerase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002885 Pentatricopeptide_repeat 284 310
IPR002885 Pentatricopeptide_repeat 901 931
IPR002885 Pentatricopeptide_repeat 422 451
IPR002885 Pentatricopeptide_repeat 937 966
IPR002885 Pentatricopeptide_repeat 359 381
IPR002885 Pentatricopeptide_repeat 391 413
IPR002885 Pentatricopeptide_repeat 248 277
IPR002885 Pentatricopeptide_repeat 868 896
IPR002885 Pentatricopeptide_repeat 527 555
IPR002885 Pentatricopeptide_repeat 757 801
IPR002885 Pentatricopeptide_repeat 455 499
IPR002885 Pentatricopeptide_repeat 968 1017
No external refs found!