At4g25470

Description : C-repeat binding factor 2 [Source:UniProtKB/TrEMBL;Acc:B2BIW9]

Gene families : OG_42_0000000 (Orthogroups_2024-Update) Phylogenetic Tree(s): No tree available for this family

Sequence : coding (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Arabidopsis release: At4g25470
Cluster	HCCA clusters: Cluster_98

Target	Alias	Description	ECC score	Gene Family Method
A4A49_03629	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_17723	No alias	ethylene-responsive transcription factor 1	0.03	Orthogroups_2024-Update
A4A49_20932	No alias	ethylene-responsive transcription factor erf114	0.02	Orthogroups_2024-Update
A4A49_21042	No alias	ethylene-responsive transcription factor 4	0.04	Orthogroups_2024-Update
A4A49_30015	No alias	ethylene-responsive transcription factor erf019	0.03	Orthogroups_2024-Update
A4A49_35008	No alias	dehydration-responsive element-binding protein 3	0.03	Orthogroups_2024-Update
A4A49_35180	No alias	ethylene-responsive transcription factor 1b	0.02	Orthogroups_2024-Update
AC206951.3_FG016	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
AC209257.4_FG006	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
At1g28160	No alias	Ethylene-responsive transcription factor ERF087...	0.05	Orthogroups_2024-Update
At1g44830	No alias	Ethylene-responsive transcription factor ERF014...	0.03	Orthogroups_2024-Update
At2g36450	No alias	Ethylene-responsive transcription factor ERF024...	0.03	Orthogroups_2024-Update
At5g25190	No alias	Ethylene-responsive transcription factor ERF003...	0.04	Orthogroups_2024-Update
At5g67190	No alias	Ethylene-responsive transcription factor ERF010...	0.03	Orthogroups_2024-Update
Bradi1g17961	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi4g29010	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Bradi5g08380	No alias	related to AP2 6l	0.03	Orthogroups_2024-Update
Brara.A00041.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.A02663.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.C04275.1	No alias	subgroup ERF-IX transcription factor	0.04	Orthogroups_2024-Update
Brara.E00876.1	No alias	subgroup ERF-III transcription factor	0.04	Orthogroups_2024-Update
Brara.F00133.1	No alias	subgroup ERF-VIII transcription factor	0.03	Orthogroups_2024-Update
Brara.G03123.1	No alias	subgroup ERF-VII transcription factor & transcription...	0.03	Orthogroups_2024-Update
Brara.H01777.1	No alias	subgroup ERF-I transcription factor	0.03	Orthogroups_2024-Update
Brara.I00667.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Brara.I01789.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Brara.I02949.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Cre07.g353500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
GRMZM2G053503	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Glyma.02G006200	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.05G228100	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.10G036700	No alias	ethylene response factor 1	0.05	Orthogroups_2024-Update
Glyma.11G014800	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.13G122600	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Glyma.17G024300	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Glyma.18G091600	No alias	ethylene responsive element binding factor 3	0.05	Orthogroups_2024-Update
HORVU1Hr1G077680.2	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
HORVU4Hr1G077310.1	No alias	subgroup ERF-VII transcription factor	0.03	Orthogroups_2024-Update
HORVU5Hr1G080340.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
LOC_Os02g43940	No alias	AP2 domain containing protein, expressed	0.02	Orthogroups_2024-Update
LOC_Os02g43970	No alias	AP2 domain containing protein, expressed	0.03	Orthogroups_2024-Update
MA_13408g0010	No alias	(at1g21910 : 95.9) encodes a member of the DREB...	0.02	Orthogroups_2024-Update
MA_20987g0010	No alias	(at2g35700 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_6305g0010	No alias	(at5g21960 : 127.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_7166g0010	No alias	(at3g60490 : 102.0) encodes a member of the DREB...	0.03	Orthogroups_2024-Update
MA_8552524g0010	No alias	(q9lw50\|erf2_nicsy : 135.0) Ethylene-responsive...	0.04	Orthogroups_2024-Update
Mp4g00380.1	No alias	no hits & (original description: none)	0.03	Orthogroups_2024-Update
Mp6g18650.1	No alias	transcription factor (ERF). transcription factor (ERN1)	0.02	Orthogroups_2024-Update
PSME_00005185-RA	No alias	(at4g17500 : 105.0) Encodes a member of the ERF...	0.04	Orthogroups_2024-Update
PSME_00037531-RA	No alias	(at5g61890 : 123.0) encodes a member of the ERF...	0.03	Orthogroups_2024-Update
Potri.001G110700	No alias	C-repeat-binding factor 4	0.02	Orthogroups_2024-Update
Potri.001G313500	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.002G085600	No alias	Integrase-type DNA-binding superfamily protein	0.04	Orthogroups_2024-Update
Potri.002G124000	No alias	related to AP2 1	0.03	Orthogroups_2024-Update
Potri.003G071666	No alias	related to AP2 12	0.04	Orthogroups_2024-Update
Potri.003G161000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.004G047500	No alias	ERF domain protein 12	0.03	Orthogroups_2024-Update
Potri.005G087200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.005G195000	No alias	Integrase-type DNA-binding superfamily protein	0.02	Orthogroups_2024-Update
Potri.006G104200	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Potri.010G006800	No alias	ethylene-responsive element binding protein	0.03	Orthogroups_2024-Update
Potri.010G072300	No alias	ethylene response factor 1	0.03	Orthogroups_2024-Update
Potri.017G055400	No alias	Integrase-type DNA-binding superfamily protein	0.03	Orthogroups_2024-Update
Pp1s15_186V6	No alias	transcriptional factor	0.03	Orthogroups_2024-Update
Seita.1G330800.1	No alias	Unknown function	0.03	Orthogroups_2024-Update
Seita.5G320400.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.001G296300.1	No alias	subgroup ERF-IX transcription factor	0.03	Orthogroups_2024-Update
Sobic.003G297600.1	No alias	subgroup ERF-IX transcription factor	0.02	Orthogroups_2024-Update
Solyc03g124110	No alias	CBF	0.03	Orthogroups_2024-Update
Solyc04g078640	No alias	Ethylene-responsive transcription factor (AHRD V3.3 -...	0.03	Orthogroups_2024-Update
Sopen05g030590	No alias	AP2 domain	0.02	Orthogroups_2024-Update
Sopen06g025620	No alias	AP2 domain	0.04	Orthogroups_2024-Update
Sopen09g032860	No alias	AP2 domain	0.03	Orthogroups_2024-Update

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003700	DNA-binding transcription factor activity	IEA	InterProScan predictions
BP	GO:0006355	regulation of transcription, DNA-templated	IEA	InterProScan predictions
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009889	regulation of biosynthetic process	None	Extended
BP	GO:0010468	regulation of gene expression	None	Extended
BP	GO:0010556	regulation of macromolecule biosynthetic process	None	Extended
BP	GO:0019219	regulation of nucleobase-containing compound metabolic process	None	Extended
BP	GO:0019222	regulation of metabolic process	None	Extended
BP	GO:0031323	regulation of cellular metabolic process	None	Extended
BP	GO:0031326	regulation of cellular biosynthetic process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051252	regulation of RNA metabolic process	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0140110	transcription regulator activity	None	Extended
BP	GO:1903506	regulation of nucleic acid-templated transcription	None	Extended
BP	GO:2000112	regulation of cellular macromolecule biosynthetic process	None	Extended
BP	GO:2001141	regulation of RNA biosynthetic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
MF	GO:0003723	RNA binding	IEP	Predicted GO
MF	GO:0004451	isocitrate lyase activity	IEP	Predicted GO
MF	GO:0004518	nuclease activity	IEP	Predicted GO
MF	GO:0004519	endonuclease activity	IEP	Predicted GO
MF	GO:0004521	endoribonuclease activity	IEP	Predicted GO
MF	GO:0004540	ribonuclease activity	IEP	Predicted GO
BP	GO:0006605	protein targeting	IEP	Predicted GO
BP	GO:0006612	protein targeting to membrane	IEP	Predicted GO
BP	GO:0006613	cotranslational protein targeting to membrane	IEP	Predicted GO
BP	GO:0006614	SRP-dependent cotranslational protein targeting to membrane	IEP	Predicted GO
MF	GO:0008312	7S RNA binding	IEP	Predicted GO
MF	GO:0016788	hydrolase activity, acting on ester bonds	IEP	Predicted GO
MF	GO:0016833	oxo-acid-lyase activity	IEP	Predicted GO
MF	GO:0016892	endoribonuclease activity, producing 3'-phosphomonoesters	IEP	Predicted GO
MF	GO:0016894	endonuclease activity, active with either ribo- or deoxyribonucleic acids and producing 3'-phosphomonoesters	IEP	Predicted GO
BP	GO:0033365	protein localization to organelle	IEP	Predicted GO
MF	GO:0033897	ribonuclease T2 activity	IEP	Predicted GO
BP	GO:0034613	cellular protein localization	IEP	Predicted GO
BP	GO:0045047	protein targeting to ER	IEP	Predicted GO
CC	GO:0048500	signal recognition particle	IEP	Predicted GO
BP	GO:0070727	cellular macromolecule localization	IEP	Predicted GO
BP	GO:0070972	protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072594	establishment of protein localization to organelle	IEP	Predicted GO
BP	GO:0072599	establishment of protein localization to endoplasmic reticulum	IEP	Predicted GO
BP	GO:0072657	protein localization to membrane	IEP	Predicted GO
BP	GO:0090150	establishment of protein localization to membrane	IEP	Predicted GO

InterPro domains	Description	Start	Stop
IPR001471	AP2/ERF_dom	49	99

External Links

No external refs found!

At4g25470

Expression Profile

Co-expression Networks

Expression Context Conservation (ECC)

Functional Annotation