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  5. Seita.5G146900.1

Seita.5G146900.1


Description : component *(SCAR) of SCAR/WAVE ARP2/3-activating complex


Gene families : OG_42_0001729 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001729_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G146900.1
Cluster HCAA Clusters: Cluster_189

Target Alias Description ECC score Gene Family Method Actions
A4A49_05860 No alias protein scar1 0.03 Orthogroups_2024-Update
At2g38440 No alias Protein SCAR2 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ9] 0.05 Orthogroups_2024-Update
At5g01730 No alias Protein SCAR4 [Source:UniProtKB/Swiss-Prot;Acc:Q5XPJ6] 0.02 Orthogroups_2024-Update
HORVU4Hr1G055030.24 No alias component *(SCAR) of SCAR/WAVE ARP2/3-activating complex 0.04 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0004527 exonuclease activity IEP Predicted GO
MF GO:0005488 binding IEP Predicted GO
MF GO:0005515 protein binding IEP Predicted GO
BP GO:0005984 disaccharide metabolic process IEP Predicted GO
BP GO:0005985 sucrose metabolic process IEP Predicted GO
BP GO:0006479 protein methylation IEP Predicted GO
MF GO:0008170 N-methyltransferase activity IEP Predicted GO
BP GO:0008213 protein alkylation IEP Predicted GO
MF GO:0008276 protein methyltransferase activity IEP Predicted GO
MF GO:0008289 lipid binding IEP Predicted GO
BP GO:0009311 oligosaccharide metabolic process IEP Predicted GO
MF GO:0016157 sucrose synthase activity IEP Predicted GO
MF GO:0016278 lysine N-methyltransferase activity IEP Predicted GO
MF GO:0016279 protein-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0016569 covalent chromatin modification IEP Predicted GO
BP GO:0016570 histone modification IEP Predicted GO
BP GO:0016571 histone methylation IEP Predicted GO
BP GO:0018022 peptidyl-lysine methylation IEP Predicted GO
MF GO:0018024 histone-lysine N-methyltransferase activity IEP Predicted GO
BP GO:0018205 peptidyl-lysine modification IEP Predicted GO
MF GO:0032182 ubiquitin-like protein binding IEP Predicted GO
BP GO:0034968 histone lysine methylation IEP Predicted GO
MF GO:0042054 histone methyltransferase activity IEP Predicted GO
MF GO:0043130 ubiquitin binding IEP Predicted GO
BP GO:0043414 macromolecule methylation IEP Predicted GO

No InterPro domains available for this sequence

No external refs found!