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  5. Seita.5G149100.1

Seita.5G149100.1


Description : TCP-type transcription factor


Gene families : OG_42_0000203 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000203_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G149100.1
Cluster HCAA Clusters: Cluster_201

Target Alias Description ECC score Gene Family Method Actions
GRMZM2G115516 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 2 0.03 Orthogroups_2024-Update
GRMZM2G120151 No alias TEOSINTE BRANCHED 1, cycloidea and PCF transcription factor 5 0.03 Orthogroups_2024-Update
HORVU5Hr1G103400.1 No alias TCP-type transcription factor 0.03 Orthogroups_2024-Update
MA_12784g0010 No alias (at3g02150 : 113.0) a chloroplast trans-acting factor of... 0.04 Orthogroups_2024-Update
Potri.001G375800 No alias TCP family transcription factor 4 0.02 Orthogroups_2024-Update
Potri.017G094800 No alias plastid transcription factor 1 0.03 Orthogroups_2024-Update
Seita.2G032900.1 No alias TCP-type transcription factor 0.04 Orthogroups_2024-Update
Solyc06g069240 No alias branched1b 0.05 Orthogroups_2024-Update

Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source
MF GO:0003993 acid phosphatase activity IEP Predicted GO
MF GO:0004540 ribonuclease activity IEP Predicted GO
MF GO:0016788 hydrolase activity, acting on ester bonds IEP Predicted GO
MF GO:0016791 phosphatase activity IEP Predicted GO
MF GO:0042578 phosphoric ester hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR017887 TF_TCP_subgr 91 187
No external refs found!