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  5. Seita.5G159400.1

Seita.5G159400.1


Description : deubiquitinase *(AMSH)


Gene families : OG_42_0001868 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0001868_tree

Sequence : coding (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G159400.1
Cluster HCAA Clusters: Cluster_121

Target Alias Description ECC score Gene Family Method Actions
Bradi2g12550 No alias associated molecule with the SH3 domain of STAM 3 0.05 Orthogroups_2024-Update
Cre01.g024300 No alias associated molecule with the SH3 domain of STAM 1 0.02 Orthogroups_2024-Update
GRMZM2G173119 No alias associated molecule with the SH3 domain of STAM 3 0.04 Orthogroups_2024-Update
GRMZM5G835530 No alias associated molecule with the SH3 domain of STAM 3 0.03 Orthogroups_2024-Update
Glyma.05G237800 No alias associated molecule with the SH3 domain of STAM 1 0.03 Orthogroups_2024-Update
Glyma.08G044900 No alias associated molecule with the SH3 domain of STAM 1 0.03 Orthogroups_2024-Update
Potri.010G141100 No alias associated molecule with the SH3 domain of STAM 3 0.03 Orthogroups_2024-Update
Solyc03g119330 No alias AMSH-like ubiquitin thioesterase 1 (AHRD V3.3 ***... 0.03 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
MF GO:0008233 peptidase activity IEA 16Dec
MF GO:0008237 metallopeptidase activity IEA 16Dec
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Type GO Term Name Evidence Source
CC GO:0000145 exocyst IEP Predicted GO
MF GO:0004721 phosphoprotein phosphatase activity IEP Predicted GO
MF GO:0004806 triglyceride lipase activity IEP Predicted GO
BP GO:0006887 exocytosis IEP Predicted GO
MF GO:0008138 protein tyrosine/serine/threonine phosphatase activity IEP Predicted GO
BP GO:0016192 vesicle-mediated transport IEP Predicted GO
MF GO:0016298 lipase activity IEP Predicted GO
MF GO:0016667 oxidoreductase activity, acting on a sulfur group of donors IEP Predicted GO
MF GO:0016670 oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor IEP Predicted GO
MF GO:0016972 thiol oxidase activity IEP Predicted GO
BP GO:0032940 secretion by cell IEP Predicted GO
CC GO:0044448 cell cortex part IEP Predicted GO
BP GO:0046903 secretion IEP Predicted GO
CC GO:0099023 tethering complex IEP Predicted GO
InterPro domains Description Start Stop
IPR015063 USP8_dimer 14 102
IPR000555 JAMM/MPN+_dom 331 437
No external refs found!