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  5. Seita.5G160800.1

Seita.5G160800.1


Description : nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha)


Gene families : OG_42_0000552 (Orthogroups_2024-Update) Phylogenetic Tree(s): OG0000552_tree

Sequence : coding (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria italica: Seita.5G160800.1
Cluster HCAA Clusters: Cluster_299

Target Alias Description ECC score Gene Family Method Actions
Brara.A01937.1 No alias nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) 0.01 Orthogroups_2024-Update
Cre04.g215850 No alias importin alpha isoform 1 0.02 Orthogroups_2024-Update
HORVU1Hr1G022750.2 No alias nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) 0.02 Orthogroups_2024-Update
Sobic.009G050700.1 No alias nucleocytoplasmic transport cargo adaptor protein *(IMP-alpha) 0.04 Orthogroups_2024-Update
Sopen01g044220 No alias Armadillo/beta-catenin-like repeat 0.02 Orthogroups_2024-Update

Type GO Term Name Evidence Source
MF GO:0005515 protein binding IEA 16Dec
BP GO:0006606 protein import into nucleus IEA 16Dec
MF GO:0061608 nuclear import signal receptor activity IEA 16Dec
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Type GO Term Name Evidence Source
MF GO:0001871 pattern binding IEP Predicted GO
MF GO:0004843 thiol-dependent ubiquitin-specific protease activity IEP Predicted GO
BP GO:0006511 ubiquitin-dependent protein catabolic process IEP Predicted GO
BP GO:0009057 macromolecule catabolic process IEP Predicted GO
MF GO:0019783 ubiquitin-like protein-specific protease activity IEP Predicted GO
BP GO:0019941 modification-dependent protein catabolic process IEP Predicted GO
MF GO:0030247 polysaccharide binding IEP Predicted GO
MF GO:0036459 thiol-dependent ubiquitinyl hydrolase activity IEP Predicted GO
BP GO:0043632 modification-dependent macromolecule catabolic process IEP Predicted GO
BP GO:0044265 cellular macromolecule catabolic process IEP Predicted GO
BP GO:0051603 proteolysis involved in cellular protein catabolic process IEP Predicted GO
MF GO:0101005 ubiquitinyl hydrolase activity IEP Predicted GO
InterPro domains Description Start Stop
IPR002652 Importin-a_IBB 12 97
IPR032413 Arm_3 452 495
IPR000225 Armadillo 271 309
IPR000225 Armadillo 240 267
IPR000225 Armadillo 159 183
IPR000225 Armadillo 355 394
No external refs found!